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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115489272, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIRLSPSMR SITISSSGIG IGGGNGGGGG GGGGVGSGLL DLMKLKAAAR HFSYRTVFHT  60
   61 VLILAFLLPF VFILTALVTL EGFNKCSSLD CLGRRLGPRL LGRGNDGSMR VMRDLYRMLD 120
  121 EINSEEVPVD LKVPDSFDEF IWDMKNNDYD LRSFAFRLKA TMESMDRELR TSRLSEQLNK 180
  181 HYAAIAIPKG LHCLSLRLTD EYSSNALARK QLPPPELIPR LSDNSYLHFV LASDNILAAS 240
  241 VVVSSTIRSS LKPGRIVFHV ITDKKTYPAM HSWFALNTLS PAIVEVKGVH QFDWLTRENV 300
  301 PVLEAIETQH TVRSRFHGNH LARNSAGDSP RVFAAKLQAG SPTYTSVLNH IRIYLPELFP 360
  361 NLNKVVFLDD DVVVQRDLSS LWDIDLGGKV NGAVETCRGG DTWVMSKRFR NYFNFSHPLI 420
  421 ANNFDPSECA WAYGMNIFDL SAWRKTSIKD KYHHWVRENL SSNFTLWRLG TLPPGLIAFR 480
  481 GHVHPIDPSW HLLGLGYQEK TDIPSVQKAA VIHYNGQSKP WLDIGFKHLQ PFWTRHVNYS 540
  541 NEFIRNCHIM EPQL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle