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Protein Overview: gi|56554489, gi|...

General Information:
Name(s) found: gi|56554497 [NCBI NR]
gi|56554496 [NCBI NR]
gi|56554495 [NCBI NR]
gi|56554494 [NCBI NR]
gi|56554493 [NCBI NR]
gi|56554492 [NCBI NR]
gi|56554491 [NCBI NR]
gi|56554490 [NCBI NR]
gi|56554489 [NCBI NR]
gi|56554488 [NCBI NR]
gi|56554485 [NCBI NR]
gi|56554484 [NCBI NR]
gi|56554483 [NCBI NR]
gi|56554482 [NCBI NR]
gi|56554481 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|56554497|pdb|1XDY|J Chain J, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase, W-Containing Cofactor [NCBI NR]
  • gi|56554496|pdb|1XDY|I Chain I, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase, W-Containing Cofactor [NCBI NR]
  • gi|56554495|pdb|1XDY|H Chain H, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase, W-Containing Cofactor [NCBI NR]
  • gi|56554494|pdb|1XDY|G Chain G, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase, W-Containing Cofactor [NCBI NR]
  • gi|56554493|pdb|1XDY|F Chain F, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase, W-Containing Cofactor [NCBI NR]
  • gi|56554492|pdb|1XDY|E Chain E, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase, W-Containing Cofactor [NCBI NR]
  • gi|56554491|pdb|1XDY|D Chain D, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase, W-Containing Cofactor [NCBI NR]
  • gi|56554490|pdb|1XDY|C Chain C, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase, W-Containing Cofactor [NCBI NR]
  • gi|56554489|pdb|1XDY|B Chain B, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase, W-Containing Cofactor [NCBI NR]
  • gi|56554488|pdb|1XDY|A Chain A, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase, W-Containing Cofactor [NCBI NR]
  • gi|56554485|pdb|1XDQ|E Chain E, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase [NCBI NR]
  • gi|56554484|pdb|1XDQ|D Chain D, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase [NCBI NR]
  • gi|56554483|pdb|1XDQ|C Chain C, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase [NCBI NR]
  • gi|56554482|pdb|1XDQ|B Chain B, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase [NCBI NR]
  • gi|56554481|pdb|1XDQ|A Chain A, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase [NCBI NR]
  • Chain F, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase, W-Containing Cofactor [nr-271106-contam.fasta]
  • Chain D, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase [nr-271106-contam.fasta]
  • Chain E, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase, W-Containing Cofactor [nr-271106-contam.fasta]
  • Chain B, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase, W-Containing Cofactor [nr-271106-contam.fasta]
  • Chain A, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase [nr-271106-contam.fasta]
  • Chain A, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase, W-Containing Cofactor [nr-271106-contam.fasta]
  • Chain E, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase [nr-271106-contam.fasta]
  • Chain B, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase [nr-271106-contam.fasta]
  • Chain C, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase, W-Containing Cofactor [nr-271106-contam.fasta]
  • Chain H, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase, W-Containing Cofactor [nr-271106-contam.fasta]
  • Chain I, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase, W-Containing Cofactor [nr-271106-contam.fasta]
  • Chain J, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase, W-Containing Cofactor [nr-271106-contam.fasta]
  • Chain D, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase, W-Containing Cofactor [nr-271106-contam.fasta]
  • Chain C, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase [nr-271106-contam.fasta]
  • Chain G, Structural And Biochemical Identification Of A Novel Bacterial Oxidoreductase, W-Containing Cofactor [nr-271106-contam.fasta]
    • Organism: Escherichia coli
    Length: 298 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLLSWFKGND RPPAPAGKAL EFSKPAAWQN NLPLTPADKV SGYNNFYEFG LDKADPAANA  60
   61 GSLKTDPWTL KISGEVAKPL TLDHDDLTRR FPLEERIYRM RCVEAWSMVV PWIGFPLHKL 120
  121 LALAEPTSNA KYVAFETIYA PEQMPGQQDR FIGGGLKYPY VEGLRLDEAM HPLTLMTVGV 180
  181 YGKALPPQNG APVRLIVPWK YGFKGIKSIV SIKLTRERPP TTWNLAAPDE YGFYANVNPY 240
  241 VDHPRWSQAT ERFIGSGGIL DVQRQPTLLF NGYADQVASL YRGLDLRENF LEHHHHHH

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|134105085, gi... gi|189095939, gi... gi|56554489, gi|...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..298] PSI-BLAST 94.39794 Structural and Biochemical Identification of a Novel Bacterial Oxidoreductase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.778719361129067 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle