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Protein Overview: tbc-4

General Information:
Name(s) found: tbc-4 / CE39418 [WormBase]
Description(s) found:
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  • WBGene00020770 locus:tbc-4 status:Partially_confirmed UniProt:Q22729 protein_id:CCD68911.1 [WormBase]
  • gi|82654531|gb|AAA93411.2| Hypothetical protein T24D11.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|115535115|ref|NP_510667.2| TBC (Tre-2/Bub2/Cdc16) domain family member (tbc-4) [Caenorhabditis elegans] [NCBI NR]
  • CE39418 WBGene00020770 locus:tbc-4 status:Partially_confirmed UniProt:Q22729_CAEEL protein_id:AAA93411.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE39418 WBGene00020770 status:Partially_confirmed UniProt:Q22729_CAEEL protein_id:AAA93411.2| [wormORF-contam.fasta]
  • CE39418 WBGene00020770 status:Partially_confirmed TR:Q22729 protein_id:AAA93411.2 [wormpep160-contam.fasta]
  • Hypothetical protein T24D11.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • T24D11.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE39418 WBGene00020770 locus:tbc-4 status:Partially_confirmed UniProt:Q22729 protein_id:AAA93411.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE39418 WBGene00020770 locus:tbc-4 status:Partially_confirmed UniProt:Q22729 protein_id:CCD68911.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
    • Organism: Caenorhabditis elegans
    Length: 435 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: regulation of Rab GTPase activity [IEALink to PubMed article]
    Molecular Function: Rab GTPase activator activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATAALRRS SDYGSADTEC GEPCETGAPV SLNEVDLLAK MEQLNKSNEE DSRSVASKKT  60
   61 GSSESRKGAR EHSPEEDEED LWSVWGELIL NWEIEVKKRP NYIKDLVKRG IPQHFRMIAW 120
  121 QNLSNASVSS VHDLYSDYMR QSSVYEKVIQ RDIPRTYPEL DFFKDGERGQ SLLFNVIKAY 180
  181 SVHDKEVGYC QGSAFIVGLL LLQMPEEEAF AVLVSLMENY RLRELYKPTM TDLGLCMFQL 240
  241 ECLVQDQMPD LYTHFNNMGF DTSMYASSWF LTLFTTTMPL DIANRIMDCF LVEGMDFIFC 300
  301 ISIAILQQAR IELLRLDMEG MLKYFQREVR ERYEFDADLL FTVANQVQLN AKRMKRLEKD 360
  361 YLTKRTKEQE EAVELRVSQK YGIIKCYGQD DVLRGRRRGG TFCSFFFLVA RNSRAHVSAK 420
  421 MLIHTHTHTH TLHAQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..89] deduced N/A No confident structure predictions are available.
    2 View Details [90..435] PSI-BLAST 50.522879 No description for 2qq8A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.79

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle