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Protein Overview: RS2_LACJO

General Information:
Name(s) found: RS2_LACJO [Swiss-Prot]
Description(s) found:
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  • gi|61215652|sp|Q74IR7.1|RS2_LACJO RecName: Full=30S ribosomal protein S2 [NCBI NR]
  • 30S ribosomal protein S2 OS=Lactobacillus johnsonii GN=rpsB PE=3 SV=1 [Swiss-Prot]
  • 30S ribosomal protein S2 [nr-271106-contam.fasta]
  • 30S ribosomal protein S2 OS=Lactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533) GN=rpsB PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Lactobacillus johnsonii
    Length: 261 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVVTMKQLL EAGVHFGHQT RRWDPKMAPY IFTQRNGIYI IDLQKTIKML DDAYNYVKAV  60
   61 AQDGGVFLFV GTKKQAQDAV KEEATRAGQY YVNQRWLGGT LTNWTTIQSR VKRLKELKQM 120
  121 SEDGTFDVLP KKEVALLTKE MEKLERFLGG IEDMPRIPDV MFVVDPKKEK IAVHEANILG 180
  181 IPVVAMVDTN TDPDPIDVVI PANDDAIRAI RLISGAMADA IIEGKQGQDD SEDVEKEMAD 240
  241 KAAAEDDEEE SIEVVVEKSE D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..261] PSI-BLAST 87.154902 No description for 1vs5B was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.68569821712377 bayes_pls_golite062009
  • structural molecule activity
    		•  9.23086340425923 bayes_pls_golite062009
  • RNA binding
    		•  0.825542354503353 bayes_pls_golite062009
  • binding
    		•  0.775544224160057 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.588158477256084 bayes_pls_golite062009
  • protein binding
    		•  0.156148644279823 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle