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Protein Overview: VP13A_MOUSE

General Information:
Name(s) found: VP13A_MOUSE [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Vacuolar protein sorting-associated protein 13A OS=Mus musculus GN=Vps13a PE=1 SV=1 [Swiss-Prot]
    • Organism: Mus musculus
    Length: 3166 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: social behavior [IMP]
    locomotory behavior [IMP]
    protein transport [IEA]
    protein localization [IEA]
    nervous system development [IMP]
    transport [IEA]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFESVVVEV LNRFLGDYVV NLDESQLSLG IWKGAVALKN LVIKENALHE LDVPFKVKVG  60
   61 HIGSLKLKIP WKNLYTQPVE AVLEEIFLLI VPSSRIQYDP IKEEKQLMET KQQELKRIEK 120
  121 AKQKVFDKEK PREEKQDTFT EKLVTQIIQN LQVQISSIHI RYEDDITNGD KPLSFGISLQ 180
  181 NISLQTTDQY WIPCLHDNTE KLVRKLIRLD NLFAYWNVNS EMFYLNDYDE SLKALKNGIV 240
  241 NENIVPEGYD FVFRPISASA KLQMNRRSDF DFSDPKINLA VDLHTIAIEF NKPQYFSLME 300
  301 LLESIDMMTQ NQPYRKFKPS VPLHLHAKEW WAYAIHSILE VNVCPSLRMW SWEHIRNHRY 360
  361 KMKRYREFYK KKLTSKKPSP EILMSLEELE KTLDVFNITI ARQQAEVEAK KAGYKIYKEG 420
  421 VKDPEDNAGW FGWLWTWSES NANQQQDVKP GILEEMLTPE EKSLLYEAIG YSETAVDPTL 480
  481 PKTFEALKFF VHLKSMSIVL RENHQKPELL NVVVEGLSTS VVQRPGAQAI KFETKIDSFH 540
  541 ITGLPDDFKK PHLLSSLDDT SLLQITFEIN PLNETVAQRC TIEAEPLEII YDARTVNSIV 600
  601 EFFRPPKDVH LAQLTSVTLT KLEEFRAKTA TGLLYVIETQ KVLDLRINVK ASYVIVPQYG 660
  661 NFSPTSNLLL LDLGHLKVSS KRRSLLPDVR PSEASLEDIM HRAYDSFDIQ LTSIQLLYSR 720
  721 VGDNWKEARK LNVSTQHILI PMHVNVELSK AMVFMDIKMP KFKISGKLPL VSLRISDKKL 780
  781 QGIMELLGSI PKPEPVTDVS APARSFQIQA SALPVSHISQ KLIPLLEQPV TEDDSEEEFF 840
  841 DAPCSPLEEC PQVSCRDKCT RQKKLQKKDC VMNLIQLRMR FEVAEVSIQF YHLVGDCELP 900
  901 VLEMGALGLG TEAEFRTFDL KGSAFLKELW LKCPEYLDEN KKPVYLITTL DNTMEDLLTL 960
  961 EFMKVEKNAP NLNSTYNNVL QLIKVNFSSL DIHLHTEALL NTMNYLNNIL PELREKSASV1020
 1021 SAAEPEDKGD IIKKLALKLP TNEDIITLQL LAELSCLQIF IQDQKQNISE IKIEGLDSEM1080
 1081 IMKPLVTEIN AKLRNIIVLD SDKMAIYKKA LYITGKEVFS FKMISYMDAT AGYAYTDMSV1140
 1141 VDIRVHLTVG CIEVVFITKF LYSILAFIDN FQAVKDALAE ATVQAAEMAA DGVKELARKS1200
 1201 SRFALDVNIK APVVLIPQSP VSQNVFVADF GLITMKNIFV TVTETQSNIP PVIDLITIKL1260
 1261 SKMRLYRSQF RNDTYQEVLD LLLPLNLEVI VERNLSWEWY KEVPCFNIKA QLKPMEFILS1320
 1321 QEDLTTVFQT LHGNIWYGQD LSAPSSANKD PETMTSGVTS PPDHSPATVV TAAVVEVHPQ1380
 1381 ASQAHTMLNV SFQTDYLTMA LYSPGPDEAS FTDVRDPSLE LAEFKLENII SSLKIYTDDS1440
 1441 TVFSFSVKNC ILDDKRSHVM KATPRMIGLT VGFDKKDMVD IKYRKIKTFV VTDAVVQEMY1500
 1501 VCASVEFLMT VAHIFFDAYM TSTALETSVQ TRTTREAPAQ ELGKWEMNIL IKNPEIVFVA1560
 1561 DMTRNDAPAL VITTQCEICC KGEPTSNTVT AAIKDLQVRA CPFLPVKRKG KVTTVLQPCD1620
 1621 LFYQATQLGR DPQMIDISVK SLTLKVSPVI INTIITITSA LYTTKETVPE ENTSNIAHLW1680
 1681 DKKDTKNLKM WFLEESNESE KVVPTNEVMP GGETLNLRID SIFIVLEAGI GHRTVPMLLA1740
 1741 KACFSGESKN WLSLINLHCH LELEVHYYNE MFGVWEPLLE PLEIDQTDDF RPWNLGIKMK1800
 1801 KKAKEAIVES DSEAENYKVP EYKTAISFYS RDQLNITLSK CGLVMLNNLV EAFTEAATGS1860
 1861 SSVFLRDLAP FMIFNSLGLT VSVSPSDSFS VLNVPLAKSY ELKNDESLSM DYVRTKDNDH1920
 1921 FNAMTSLSSK LFFILLTPAN HSVADKIPLT KVGRRLYTVR HRESGVERSI ICQIDTVEGS1980
 1981 KKVTIRSPVQ IKNHFSIPIS VFEGDTLLGI ASPENEFNIP LASYRSSLSL VPEDQDYQLC2040
 2041 EGIDFEEIIK YDGQLLKKKC RSTNPSKKSF VINIVPEKDN LASLSVYSED GWDLPYVLHL2100
 2101 WPPILIRNLL PYKVAYYIEG IENTVVTLSE GHSSQIYNVE MDQAKLHLKL LDYLNHDWKS2160
 2161 EFYIRSSQQD INFINFTCLT EMEKSDLDIA IHMTYNTGQT VVAFHSPYWM VNKTNRMLQY2220
 2221 KADGIHRKHP PNYTKPVLFS FQPNHFFNNN KVQLMVTDSE LSDQFSIDTV GSHGAIRCKG2280
 2281 LKMEYQVGVT INLSSFNITR IVTFIPFYMI KNKSKYHISV AEEGSDKWLS LDLEQSIPFW2340
 2341 PENASNILLI QVERSEDPPK RIYFNKQDNC ILLRLNNELG GIIAEVNLAE HSTVITFSDY2400
 2401 HDGAATFLLI NHTKSDPVQY NQSSLGEIED SLPPGKAVYY TWADPVGSRK LKWSCGQSYG2460
 2461 EVTHKDDMMT PISVGKKTIY LVSFFEGLQR IILFTEDPRV FKVTYESEKA ELAELEVVLA2520
 2521 LQDVGISLVN NYTKQEVAYI GITSSDVVWE AKPKKKARWK PMSVKHTEKL EKEFREYTEA2580
 2581 SPLEDKVVEL DNIPVRLTPS GNDMKILQPH VIPVRRNYLP ALKVEYNTSA HQSSFRIQIY2640
 2641 RIQIQNQIHG AIFPFVFYPI KPPRSVTMDS APKPFTDVSI VMRSAGHSQI SRIKYFKVLI2700
 2701 QEMDLSLDLG FVYALADLVT KAEVTEKTEV EHFHKDVEAF EQEYEVVSSV DQSQVNLFEY2760
 2761 FHISPIKLHL SVSLSSGRDE AKDSEQHGGL IPVHSLNLLL KSIGATLTDV QDVVFKLAFF2820
 2821 ELNYQFHTTS ELQSEVIRHY SKQAIKQMYV LILGLDVLGN PFGLIREFSE GVEAFFYEPY2880
 2881 QGAIQGPEEF VEGMALGLKA LVGGAVGGLA GAASKITSAM AKGVAAMTMD EDYQQKRREA2940
 2941 MNKQPAGLRE GITRGGKGLV SGFVSGITGI VTKPIKGAQK EGAAGFFKGV GKGLVGAVTR3000
 3001 PTGGIIDMAS STFQGIKRAT ETSEVESLRP PRFFNEDGVI RPYRLRDGSG NQMLQVMENG3060
 3061 RFAKYKYFTH VMINKTDMFM ITRRGVLFVT KGTFGQLTCE WQYTFDEFTK EPFIVHGRRL3120
 3121 RIEAKERVKS VFHAKEFGKI VNFKTPEDAR WILTKLEEAR EPSPRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle