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Protein Overview: ubc-3

General Information:
Name(s) found: ubc-3 / CE38573 [WormBase]
Description(s) found:
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  • WBGene00006702 locus:ubc-3 status:Confirmed UniProt:Q95XN7 protein_id:CCD67972.1 [WormBase]
  • gi|71996299|ref|NP_490882.3| UBiquitin Conjugating enzyme family member (ubc-3) [Caenorhabditis elegans] [NCBI NR]
  • gi|62630029|gb|AAK73914.3|AC025726_7 Ubiquitin conjugating enzyme protein 3, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • CE38573 WBGene00006702 locus:ubc-3 status:Confirmed TR:Q95XN7 protein_id:AAK73914.3 [wormpep150.fasta]
  • 38573 WBGene00006702 locus:ubc-3 status:Confirmed TR:Q95XN7 protein_id:AAK73914.3 [wormpep150-phg-orf-ecoli-rand.fasta]
  • CE38573 WBGene00006702 locus:ubc-3 status:Confirmed UniProt:Q95XN7_CAEEL protein_id:AAK73914.3 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE38573 WBGene00006702 locus:ubc-3 status:Confirmed UniProt:Q95XN7_CAEEL protein_id:AAK73914.3| [wormORF-contam.fasta]
  • UBiquitin Conjugating enzyme family member (ubc-3) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Ubiquitin conjugating enzyme protein 3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE38573 WBGene00006702 locus:ubc-3 status:Confirmed UniProt:Q95XN7 protein_id:AAK73914.3 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE38573 WBGene00006702 locus:ubc-3 status:Confirmed UniProt:Q95XN7 protein_id:CCD67972.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • UBiquitin Conjugating enzyme OS=Caenorhabditis elegans GN=ubc-3 PE=1 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 243 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: protein modification process [IEALink to PubMed article]
    ubiquitin cycle [IEALink to PubMed article]
    Molecular Function: small conjugating protein ligase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSKASTSSG ALRALTMELK NLQSQPVEGF TIDVNEDNLF VWTVGIYGPP KTLYQGGYFK  60
   61 ASIRFPSNYP YSPPSMKFTT KVWHPNVYEN GDLCISILHS PIDDPQSGEL ACERWNPTQS 120
  121 VRTILLSVIS LLNEPNTSSP ANVDASVMYR KWKEDQDPEY AKIVTKQVEE SKKVAQKDGI 180
  181 QVPETIEEYC VKWAPPQQDD VFDDIDYNDD FGCDYDDDEE EEDEDECGSD YNDDDEDSGQ 240
  241 GEN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..243] PSI-BLAST 44.0 No description for 2ob4A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle