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Protein Overview: zfp-3

General Information:
Name(s) found: zfp-3 / CE38432 [WormBase]
Description(s) found:
Found 13 descriptions.
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  • WBGene00021047 locus:zfp-3 status:Confirmed UniProt:H2KZI6 protein_id:CCD68298.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 666 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: RNA interference [IMP]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADVYTPTKT MDGAFLPAVG SPNTSIDSPA VYVPTPLTAP STSKTTPVKP EDQTTRQKYG  60
   61 GSVSYSPSNP GIRIVKRKPK PEAVAAAAAV PTAIYSGKRH ATDDGEDAGL AALKLYFQKP 120
  121 NRGILRGPAI SNLNQRGTRR LIFADTRGLP LVHVKEIERI AAIHSNVADY RCSERNEAAA 180
  181 FGQEMEVFED VEWSLVPVKR SKPARSEMSE SGLREERRIE EEGIMRGAMF GMCQLEDNPA 240
  241 LNEQAAVDRA NYTPTIIPTV SVPSEPTTLA TIRDLPLPGR PPRVRPQDLL LQVKPNQGFH 300
  301 TLPLYHSQRP ENPRRPMYAQ QQQQQSAHQT PTPHIQQVFQ ETEPVTNYYT ATTSVPETPE 360
  361 PAPAAQPASR FELPSNLKEM LNQLKKKGFV SSDETPSPTT SAPPPVDPLA AAMQTAQQMM 420
  421 LQQGNTYASE EVPQDYPMDG YVATFATPEM MAQERRQDSR NSEGWTQSGW KIPEPCVYFI 480
  481 SRPGGCNRGD QCRFIHDEEM RRQKMAELPP RGPNHHHDNF RGGRGRGFRG GYNNRNNYNN 540
  541 HHDRDFRDNA GGNRGRFGDT EGFRGARYAR GGFAPRNNSR FDQKPAYNDD GGHLGSPNAH 600
  601 GSQYQDPVPT KRARVSRFDR QGEDDAPGQD MDQRPPRRNR FDEQPPRRTF RSRFDQQADH 660
  661 DEMSQA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..213] deduced N/A No confident structure predictions are available.
    2 View Details [214..666] PSI-BLAST 24.0 No description for 1y0fA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle