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View Structure Prediction Details

Protein: zfp-3
Organism: Caenorhabditis elegans
Length: 666 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for zfp-3.

Description E-value Query
Range
Subject
Range
zfp-3 - status:Confirmed UniProt:Q8MPS9 protein_id:AAQ01521.1
349.0 [0..1] [666..1]

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Predicted Domain #1
Region A:
Residues: [1-213]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADVYTPTKT MDGAFLPAVG SPNTSIDSPA VYVPTPLTAP STSKTTPVKP EDQTTRQKYG  60
   61 GSVSYSPSNP GIRIVKRKPK PEAVAAAAAV PTAIYSGKRH ATDDGEDAGL AALKLYFQKP 120
  121 NRGILRGPAI SNLNQRGTRR LIFADTRGLP LVHVKEIERI AAIHSNVADY RCSERNEAAA 180
  181 FGQEMEVFED VEWSLVPVKR SKPARSEMSE SGL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [214-666]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 REERRIEEEG IMRGAMFGMC QLEDNPALNE QAAVDRANYT PTIIPTVSVP SEPTTLATIR  60
   61 DLPLPGRPPR VRPQDLLLQV KPNQGFHTLP LYHSQRPENP RRPMYAQQQQ QQSAHQTPTP 120
  121 HIQQVFQETE PVTNYYTATT SVPETPEPAP AAQPASRFEL PSNLKEMLNQ LKKKGFVSSD 180
  181 ETPSPTTSAP PPVDPLAAAM QTAQQMMLQQ GNTYASEEVP QDYPMDGYVA TFATPEMMAQ 240
  241 ERRQDSRNSE GWTQSGWKIP EPCVYFISRP GGCNRGDQCR FIHDEEMRRQ KMAELPPRGP 300
  301 NHHHDNFRGG RGRGFRGGYN NRNNYNNHHD RDFRDNAGGN RGRFGDTEGF RGARYARGGF 360
  361 APRNNSRFDQ KPAYNDDGGH LGSPNAHGSQ YQDPVPTKRA RVSRFDRQGE DDAPGQDMDQ 420
  421 RPPRRNRFDE QPPRRTFRSR FDQQADHDEM SQA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.0
Match: 1y0fA
Description: No description for 1y0fA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle