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Protein Overview: nfm-1

General Information:
Name(s) found: nfm-1 / CE37913 [WormBase]
Description(s) found:
Found 13 descriptions.
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  • WBGene00003593 locus:nfm-1 status:Partially_confirmed UniProt:Q5LK46 protein_id:CCD65311.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 641 amino acids

    Gene Ontology:
    Cellular Component: cytoskeleton [IEALink to PubMed article]
    cytoplasm [IEALink to PubMed article]
    extrinsic to membrane [IEALink to PubMed article]
    Biological Process: protein amino acid dephosphorylation [IEALink to PubMed article]
    Molecular Function: protein tyrosine phosphatase activity [IEALink to PubMed article]
    cytoskeletal protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGFSIFSRN TKPIYAKVST MDADLEKIVI EKTWTGRHLF EAVCRIIGLR ETWYFGLQFT  60
   61 NKKNIPCWLQ NDKTICGQDI QKDTSDGTFN FLFLVKFYPE DVEPEIILDA TRHLFFLQIR 120
  121 EAILSMNLYC SPEASVLLAS FAVQAMHGDC TEEVGPIDLD KHLPKSVIDQ YDMSADMWRD 180
  181 RIKRWWSRNA GQSREEAELE YLRVAQDLEM YGILYYPICN NKETDLHLGI SAQGLGIYKG 240
  241 VNRITPRPFF SWSEIKNIQF KNRKFHMKTV DKSTISFRSR ETSIDSSILD LCIGTHNLYL 300
  301 RRRQPDTLEV QQMRSQAKED KQRRAAEQAK VALERKERQQ MEKEYKEMKQ KVEVMTLELM 360
  361 KAQENIRKAE EANDQLAEKA RHSEHETLML YKQKSEVEAE CNRLSMNNMK SEEALLRMER 420
  421 KAREAEILAK QMSMSLADVS LDANRKMTQY SSQSALIIDP NWHQQVSGHQ SGHPGMPSTG 480
  481 SFHQLQSLDT HTHPQQMMSR SLNMPSSAFS SPIPSNQPLS HQQPQQMSQN TQAHQQQTQV 540
  541 QNQNQPPYYG GSGMIIPPPD PSISQIFEQQ TTLMELEKSR SEYETRARIF KEHLEELRGD 600
  601 IDGLKRDGNV QNGQHREHDA VHAQNVAHGF DKFTTMRMVS R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..552] PSI-BLAST 64.69897 No description for 2i1jA was found.
    2 View Details [553..641] PSI-BLAST 18.39794 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle