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Protein Overview: tag-214

General Information:
Name(s) found: tag-214 / CE39152 [WormBase]
Description(s) found:
Found 14 descriptions.
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  • WBGene00009477 locus:rbpl-1 status:Confirmed UniProt:Q38G51 protein_id:CAJ34990.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 363 amino acids

    Gene Ontology:
    Cellular Component: ubiquitin ligase complex [IEALink to PubMed article]
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    gastrulation with mouth forming first [IMPLink to PubMed article]
    protein ubiquitination [IEALink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    ubiquitin-protein ligase activity [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]
    protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSIHYKFRA ELDYKTLQFD GLHIRGEQLV REICAKENLK LELFELQLQN AHTKKTYSDD  60
   61 ELIPRNSSII VQRFPRKDAA KVQKVQAGVN SGMVNQLDAT SSFLDPSSHI SSAEFENMDE 120
  121 AERLNHIRDQ STRAYDQSNF RRRQPGIMTG PPPPTYTCNR CSQPGHWYKN CPMKLQAPKT 180
  181 KVKREDKKRD DRKDYERDRE RRKDDYEKEK SKRKESDRDN EKEKQREKEV EKEHEKDRKE 240
  241 KRKIVEKESE KPRKSVHERM QKADSSTSSS SRTTTAPSLE RKPVSFTVAS SKPTTNIRVR 300
  301 QYSSSSSTKE QEDEERSKRD RRKKDETDVE SIGEKEKKSS SRKVPKESVD VKHKSTKIKF 360
  361 DLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..86] PSI-BLAST 31.522879 Solution NMR structure of the DWNN domain from human RBBP6
    2 View Details [87..150] deduced N/A No confident structure predictions are available.
    3 View Details [151..363] PSI-BLAST 3.39794 Solution Structure of Choline Binding Protein A, Domain R2, the Major Adhesin of Streptococcus pneumoniae


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle