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Protein Overview: CE37904

General Information:
Name(s) found: CE37904 [WormBase]
Description(s) found:
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  • WBGene00018006 locus:hpo-3 status:Confirmed UniProt:O44780 protein_id:CCD66442.1 [WormBase]
  • gi|71985398|ref|NP_491701.2| hypothetical protein F33D11.9 [Caenorhabditis elegans] [NCBI NR]
  • gi|56797836|gb|AAB96702.2| Hypothetical protein F33D11.9a [Caenorhabditis elegans] [NCBI NR]
  • CE37904 WBGene00018006 status:Confirmed TR:O44780 protein_id:AAB96702.2 [wormpep150.fasta]
  • 37904 WBGene00018006 status:Confirmed TR:O44780 protein_id:AAB96702.2 [wormpep150-phg-orf-ecoli-rand.fasta]
  • CE37904 WBGene00018006 status:Confirmed UniProt:O44780_CAEEL protein_id:AAB96702.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE37904 WBGene00018006 status:Confirmed UniProt:O44780_CAEEL protein_id:AAB96702.2| [wormORF-contam.fasta]
  • F33D11.9a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein F33D11.9a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE37904 WBGene00018006 status:Confirmed UniProt:O44780 protein_id:AAB96702.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE37904 WBGene00018006 locus:hpo-3 status:Confirmed UniProt:O44780 protein_id:CCD66442.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Isoform of Q95X60, Uncharacterized protein OS=Caenorhabditis elegans GN=hpo-3 PE=1 SV=3 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 282 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    GPI-anchor transamidase complex [IEALink to PubMed article]
    Biological Process: tRNA processing [IEALink to PubMed article]
    Molecular Function: pseudouridylate synthase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYIIPLTILV SPLVISAYFE WTKIQEFQFP VVHLAFHVLG FFYYIATTYV FQTIGTTFVL  60
   61 QWMQWPFVGI DGCDGQFTPS WSLINSFLIF FMIPLGPYVF LKEPVRCVPS MRIVCLLETS 120
  121 LVLYGICLTN FGLAILCTAF VVPIVFLMTY ESSDRTRSIF RSSVLAILNP ISVLAFVAIN 180
  181 IPGMFGQLFP TISQDSWLAA AQSIALTAIR EDVEFKVNHF FLLCCFGYPI WNMLFACSMR 240
  241 YGPEPQGSLG IFGNGSDDDD GDDDDGPQKT NRGHSTKKNK RE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..95] deduced N/A No confident structure predictions are available.
    2 View Details [96..282] MSA 1.002937 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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