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Protein Overview: ahr-1

General Information:
Name(s) found: ahr-1 / CE38293 [WormBase]
Description(s) found:
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  • WBGene00000096 locus:ahr-1 Aryl hydrocarbon receptor protein 1 status:Confirmed UniProt:O44712 protein_id:CAI79126.1 [WormBase]
  • gi|71981705|ref|NP_001021037.1| Aryl Hydrocarbon Receptor related family member (ahr-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|62553973|emb|CAI79126.1| C. elegans protein C41G7.5b, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • CE38293 WBGene00000096 locus:ahr-1 status:Confirmed TR:Q564W4 protein_id:CAI79126.1 [wormpep150.fasta]
  • 38293 WBGene00000096 locus:ahr-1 status:Confirmed TR:Q564W4 protein_id:CAI79126.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • CE38293 WBGene00000096 locus:ahr-1 status:Confirmed UniProt:Q564W4_CAEEL protein_id:CAI79126.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE38293 WBGene00000096 locus:ahr-1 status:Confirmed UniProt:Q564W4_CAEEL protein_id:CAI79126.1| [wormORF-contam.fasta]
  • Aryl Hydrocarbon Receptor related family member (ahr-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C41G7.5b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE38293 WBGene00000096 locus:ahr-1 status:Confirmed UniProt:O44712 protein_id:CAI79126.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE38293 WBGene00000096 locus:ahr-1 status:Confirmed UniProt:O44712 protein_id:CAI79126.1 Aryl hydrocarbon receptor protein 1 [wormpep246-ecoli-contam.fasta]
  • Isoform of O44712, Isoform b of Aryl hydrocarbon receptor protein 1 OS=Caenorhabditis elegans GN=ahr-1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 560 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    intracellular [TASLink to PubMed article]
    Biological Process: signal transduction [IEALink to PubMed article]
    regulation of transcription, DNA-dependent [IEALink to PubMed article]
    response to xenobiotic stimulus [IDALink to PubMed article]
    regulation of transcription [IEALink to PubMed article][ISSLink to PubMed article]
    intracellular receptor mediated signaling pathway [TASLink to PubMed article]
    Molecular Function: DNA binding [IDALink to PubMed article]
    transcription regulator activity [IEALink to PubMed article][TASLink to PubMed article]
    signal transducer activity [IEALink to PubMed article][ISSLink to PubMed article]
    aryl hydrocarbon receptor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLPYDSSTI SRLDKLSVLR LAVSFLQCKA HFQACLHNSQ FLSAGFPMST HSYSYQPHPP  60
   61 IPFSNKVPTI FDLRIGTPML DPEESNFEEI SLKSLGGFIL VLNDNGEIYY ASENVENYLG 120
  121 FHQSDVLHQP VYDLIHSEDR DDIRQQLDSN FHIPTSSASN QFDVFAPQNS KYLERNVNAR 180
  181 FRCLLDNTCG FLRIDMRGKL MSLHGLPSSY VMGRTASGPV LGMICVCTPF VPPSTSDLAS 240
  241 EDMILKTKHQ LDGALVSMDQ KVYEMLEIDE TDLPMPLYNL VHVEDAVCMA EAHKEAIKNG 300
  301 SSGLLVYRLV STKTRRTYFV QSSCRMFYKN SKPESIGLTH RLLNEVEGTM LLEKRSTLKA 360
  361 KLLSFDDSFL QSPRNLQSTA ALPLPSVLKD DQDCLEPSTS NSLFPSVPVP TPTTTKANRR 420
  421 RKENSHEIVP TIPSIPIPTH FDMQMFDPSW NHGVHPPAWP HDVYHLTQYP PTYPHPPGTV 480
  481 GYPDVQIAPV DYPGWHPNDI HMTQLPHGFT PDAQKLVPPH PQMSHFTEYP TPSTHHDLHH 540
  541 HPLKQDNFHL ISEVTNLLGT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] deduced N/A No confident structure predictions are available.
    2 View Details [81..476] PSI-BLAST 55.045757 Crystal Structure of the PAS repeat region of the Drosophila clock protein PERIOD
    3 View Details [477..560] MSA 5.254997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.65

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle