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Protein Overview: srbc-32

General Information:
Name(s) found: srbc-32 / CE38025 [WormBase]
Description(s) found:
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  • WBGene00015317 locus:srbc-32 status:Confirmed UniProt:Q5F4V5 protein_id:CCD62481.1 [WormBase]
  • gi|71982233|ref|NP_503973.2| Serpentine Receptor, class BC (class B-like) family member (srbc-32) [Caenorhabditis elegans] [NCBI NR]
  • gi|59676967|gb|AAW88415.1| Serpentine receptor, class bc (class b-like) protein 32 [Caenorhabditis elegans] [NCBI NR]
  • CE38025 WBGene00015317 locus:srbc-32 status:Predicted TR:Q5F4V5 protein_id:AAW88415.1 [wormpep150.fasta]
  • [wormpep130-phg-ecoli-orf-rand.fasta]
  • 38025 WBGene00015317 locus:srbc-32 status:Predicted TR:Q5F4V5 protein_id:AAW88415.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • CE38025 WBGene00015317 locus:srbc-32 7TM chemoreceptor, srbc family status:Partially_confirmed UniProt:Q5F4V5_CAEEL protein_id:AAW88415.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE38025 WBGene00015317 locus:srbc-32 7TM chemoreceptor, srbc family status:Partially_confirmed UniProt:Q5F4V5_CAEEL protein_id:AAW88415.1| [wormORF-contam.fasta]
  • CE38025 WBGene00015317 locus:srbc-32 7TM chemoreceptor, srbc family status:Predicted TR:Q5F4V5 protein_id:AAW88415.1 [wormpep160-contam.fasta]
  • Serpentine receptor, class bc (class b-like) protein 32 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Serpentine Receptor, class BC (class B-like) family member (srbc-32) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE38025 WBGene00015317 locus:srbc-32 7TM chemoreceptor, srbc family status:Partially_confirmed UniProt:Q5F4V5 protein_id:AAW88415.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE38025 WBGene00015317 locus:srbc-32 7TM chemoreceptor, srbc family status:Confirmed UniProt:Q5F4V5 protein_id:CCD62481.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE38025 WBGene00015317 locus:srbc-32 status:Confirmed UniProt:Q5F4V5 protein_id:CCD62481.1 7TM GPCR, serpentine receptor class bc (Srbc) [wormpep246-ecoli-contam.fasta]
  • Serpentine Receptor, class BC (Class B-like) OS=Caenorhabditis elegans GN=srbc-32 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 297 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIIITVVCL LGAVSSLVTI VLNGNLVWKI VLKKSKRNDD LQLFYYRFTM DICFSTCLLV  60
   61 YIIFVILTME VPHLFSNHRG LIVTLGLPWS NFATCRSAIA LAISLERLIA AYFPIRYRTA 120
  121 RNKIPNFSIF SMAVAFALSE ELVLFGFCSY SFDIPPNCRA FGCAVNQCFY NFWTAHRTII 180
  181 FAIILVSSIL LSVKLFVWNN SKGKQSSKHL SKTNRLALLN TCTVFIFDFV PSFFGTMWPT 240
  241 APMFNFDLVG PYNAVSKITG CAIDSFLVSR LLLKKDHGVA ASTVTTILQK VSRNSSL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..297] PSI-BLAST 24.69897 Rhodopsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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