YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: agt-1

General Information:
Name(s) found: agt-1 / CE38250 [WormBase]
Description(s) found:
Found 14 descriptions.
SHOW ALL
  • WBGene00000093 locus:agt-1 status:Confirmed UniProt:Q9U1Y0 protein_id:CAB60594.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 175 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ICLink to PubMed article]
    Biological Process: DNA dealkylation involved in DNA repair [IDALink to PubMed article]
    DNA repair [IEALink to PubMed article]
    Molecular Function: methylated-DNA-[protein]-cysteine S-methyltransferase activity [IEALink to PubMed article]
    damaged DNA binding [IDALink to PubMed article]
    transferase activity, transferring alkyl or aryl (other than methyl) groups [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIRECVYEV VETDQGQALI AECVGSQKVV AIYLLDDDLD DQMEELHDAY PTVNFIPGKP  60
   61 TQSSGIVQAL NTLDSTIKVN AVHKGDTAFG MQVYSAIQKI PKGETRSYSD IAREIGNPSA 120
  121 VRAVASACAR NNLAYIVPCH RVIGSTGNLS GYRWGIAKKR RLLQAEGAEL RFSVM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..175] PSI-BLAST 43.09691 ADA O6-METHYLGUANINE-DNA METHYLTRANSFERASE FROM ESCHERICHIA COLI

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.00788668585776 bayes_pls_golite062009
  • transferase activity
    		•  0.599393349879121 bayes_pls_golite062009
  • binding
    		•  0.5468259332796 bayes_pls_golite062009
  • methylated-DNA-[protein]-cysteine S-methyltransferase activity
    		•  0.253609762979736 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.134910724042877 bayes_pls_golite062009
  • S-methyltransferase activity
    		•  0.129963524126145 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.12471050541438 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle