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Protein Overview: CE40423

General Information:
Name(s) found: CE40423 [WormBase]
Description(s) found:
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  • WBGene00012012 status:Partially_confirmed UniProt:Q22769 protein_id:CAA94377.3 [WormBase]
  • gi|133930950|ref|NP_501995.3| hypothetical protein T25B9.6 [Caenorhabditis elegans] [NCBI NR]
  • gi|114420881|emb|CAA94377.3| C. elegans protein T25B9.6, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep130-phg-ecoli-orf-rand.fasta]
  • CE40423 WBGene00012012 status:Partially_confirmed UniProt:Q22769_CAEEL protein_id:CAA94377.3 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE40423 WBGene00012012 status:Partially_confirmed UniProt:Q22769_CAEEL protein_id:CAA94377.3| [wormORF-contam.fasta]
  • [wormORF-contam.fasta]
  • Hypothetical protein T25B9.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE40423 WBGene00012012 status:Partially_confirmed TR:Q22769 protein_id:CAA94377.3 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE40423 WBGene00012012 status:Partially_confirmed UniProt:Q22769 protein_id:CAA94377.3 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_T25B9.6 PE=4 SV=3 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 602 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: phosphopantetheine binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMTNNFNYGP RINFEKLHQH LPHSTIIPSE YLEPISASES KSTRPSESLA SGTSTLGSHW  60
   61 KRVDSSVKSD NTTAPPSSFS TYSDGTVVPS VYSVRSFDYP PLSESSVSLN TVSQVTTSTE 120
  121 SSAASALSVG TRDFRKCINL QMLGLDELDS TLDRASEQFS DSFWKESTDY DQAVKKGEIL 180
  181 WQKFEELIEC LNEKSGDCTD EELPAQGEKF LDYGTVILKT FRTKYRIEKF VRNTESVYIT 240
  241 NNNTLEMILD NEKSVQKIRK NLSIIRKMEA YFLTVSENKD NRVKEFFRGI VNMVPTLPLN 300
  301 QNERADIDHV IRNIEEDSKF ENKYKCELIM RHLLATISNW DKETHGTNSN LGSSIWKSIP 360
  361 SEMHTASQNS YVSEVIESSS FELANLSTDD SNLADLEGEL RSASIRRAVE GPKGIYEFGP 420
  421 WDTASIFSQF SNNSDGHTSI QSLQDHHSSY ELSSSDDHSI LPSLSSRSVP NKIFENTVKE 480
  481 IVQDDLDLKT ALSIGEPIVA GLPRTPIDNE TEVVRSCTQS DSADTFNFSS VSLNEMVDDA 540
  541 LHTAKGVESA SATNTSATNL LDALHSSALK CGVAFNDLMT AISSSSESVS DTQASHHSSA 600
  601 SH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..81] deduced N/A No confident structure predictions are available.
    2 View Details [82..299] deduced N/A No confident structure predictions are available.
    3 View Details [300..362] deduced N/A No confident structure predictions are available.
    4 View Details [363..602] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle