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Protein Overview: CE41448

General Information:
Name(s) found: CE41448 [WormBase]
Description(s) found:
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  • WBGene00011502 locus:vps-53 status:Partially_confirmed UniProt:P34561 protein_id:CAA81595.2 [WormBase]
  • gi|193210388|ref|NP_499157.2| hypothetical protein T05G5.8 [Caenorhabditis elegans] [NCBI NR]
  • gi|161784340|sp|P34561.3|YNP8_CAEEL RecName: Full=Uncharacterized protein T05G5.8 [NCBI NR]
  • gi|154147323|emb|CAA81595.2| C. elegans protein T05G5.8, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • Uncharacterized protein T05G5.8 OS=Caenorhabditis elegans GN=T05G5.8 PE=2 SV=3 [Swiss-Prot]
  • [wormpep130-phg-ecoli-orf-rand.fasta]
  • CE41448 WBGene00011502 status:Partially_confirmed UniProt:YNP8_CAEEL protein_id:CAA81595.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • [wormORF-contam.fasta]
  • CE41448 WBGene00011502 status:Partially_confirmed UniProt:YNP8_CAEEL protein_id:CAA81595.2| [wormORF-contam.fasta]
  • CE41448 WBGene00011502 status:Partially_confirmed SW:P34561 protein_id:CAA81595.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE41448 WBGene00011502 locus:vps-53 status:Partially_confirmed UniProt:P34561 protein_id:CAA81595.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
    • Organism: Caenorhabditis elegans
    Length: 798 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: negative regulation of multicellular organism growth [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEPTTSELK LSDNVMNEIS DMCITEYCKP NMSLMAQINE LFPTEQSLTQ LDSIIASVEG  60
   61 EIGELDNELA YLVETNANVS ERGEEALKHA QDAMIELEKS IGSIRERTKS SDEIVREMTR 120
  121 DIKQLDIAKR NLTASITTLH HLHILLTGVE SLGAWVDKKD YSSIARQLPA ILNVLQLFDA 180
  181 YKESDQIANL SGQLDKLKAS LTIQLAKDLK NAFQTGQLSD RITDMCRVAA ALEGNVKENF 240
  241 VKWFIEQQLS EYVIIYADNE EGAWLDKVDD RYKWFVRKLT DFERAGLSNI FPADWHMGRR 300
  301 LTSEFCTVTR DILYRIMTRR RQDLDWKLLG HAIQHTKMFE ALLTKRFPEK DGISFEKAIW 360
  361 SVFDTFLDVF INAQEKTLNE FLDTCASKIR SGEEKPSRES STHAVPFPSS ADMFLLLKKV 420
  421 ITESSKLSSE PDALIRDVIG VVRVCLRGYA TSCLVAFLPS LGSQQSGAAN LFSLIREEIA 480
  481 YPRLTPDQQF LVCCILATAD WCAETSIQLQ EKLSQRIPGV DISQETEAFY SITNQSLQVL 540
  541 VQDVESTCDA ALQSISKVNW TAVDCVGDES PFIGSMRAHL RQAVPLIRDM LSDRRKYFAH 600
  601 FCLKLATQLA HKFVGSLFRC RTISTHGAEQ LLLETHSLKT FLLSVPSIDS IINSKPPTAY 660
  661 VTSVNAALTK AEMILKVVMC SLETVDEFVE QYIKLLPASD AAEMQKVLEM KGVKRQEHSA 720
  721 VLNAYRLKIG ASGSDPIQQS NSLTSRIGGA LPTVGSAASV SEAFNAVVSM AADGLSDQAV 780
  781 TSSIDKLKRF ERLVKRQL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..262] FFAS03 1.15 No description for 2i1jA was found.
    2 View Details [263..356] deduced N/A No confident structure predictions are available.
    3 View Details [357..798] PSI-BLAST 43.69897 No description for 2fji1 was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle