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Protein Overview: CE40222

General Information:
Name(s) found: CE40222 [WormBase]
Description(s) found:
Found 11 descriptions.
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  • WBGene00022174 status:Partially_confirmed UniProt:Q3V5J4 protein_id:CCD73887.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 495 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: cation transport [IEALink to PubMed article]
    Molecular Function: cation transmembrane transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPMSLVISN VNTVFRRKNP ILMVSMVRCL SSNQPTDDDM HISKRKLKKL FKVAQLSKKS  60
   61 RSYENDKIDK LSAMAEFGLK ESDLEDLPSH SKPVLSLTHH GKSNHQLYTL TEVYHKALKV 120
  121 HGSTEALEAH RRPLVAMRKE LTDAERMRMR MRVETTNQHK GADRVVAIAF TLNLCDMAMK 180
  181 FTAAYLTGSK SLFAEAIHSA MDTCNQLILL LGIRYSAKNP DLLFPYGYGN MRYVTSLISG 240
  241 CGIMAFGCGL SMYHGISGLL HPEPLEPLTY AYYALFMSLC FQGTSAITAY REVFAKAKKA 300
  301 NISIWNYVRT SADPSLNVVL LEDTAAVTGV GIALCAISLS SFLNSPIPDC CGSIVIGALL 360
  361 GTVASFIIRT NAAHLVGRSL PQRITDDIVA RLNNDPMIRS VHDVKATCLG VEQSRFKAEL 420
  421 DFDGRMITRA YLQEGVHLPA LLNEVKKIDT EDQLVVFMEN HGEKVIDRLG DEIDRIEGEI 480
  481 TKKHPDIRHV DLEAL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..153] PSI-BLAST 30.69897 SOLUTION STRUCTURE OF THE DNA-AND RPA-BINDING DOMAIN OF THE HUMAN REPAIR FACTOR XPA, NMR, 1 STRUCTURE
    2 View Details [154..495] PSI-BLAST 51.69897 No description for 2qfiA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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