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Protein Overview: CE39077

General Information:
Name(s) found: CE39077 [WormBase]
Description(s) found:
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  • WBGene00022391 status:Partially_confirmed UniProt:H2L0P4 protein_id:CCD73548.1 [WormBase]
  • gi|86561648|ref|NP_001032993.1| hypothetical protein Y95B8A.12 [Caenorhabditis elegans] [NCBI NR]
  • gi|74217980|gb|ABA00174.1| Hypothetical protein Y95B8A.12b [Caenorhabditis elegans] [NCBI NR]
  • CE39077 WBGene00022391 status:Partially_confirmed TR:Q3V5J0 protein_id:ABA00174.1 [wormpep150.fasta]
  • [wormpep130-phg-ecoli-orf-rand.fasta]
  • 39077 WBGene00022391 status:Partially_confirmed TR:Q3V5J0 protein_id:ABA00174.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • CE39077 WBGene00022391 status:Partially_confirmed UniProt:Q3V5J0_CAEEL protein_id:ABA00174.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE39077 WBGene00022391 status:Partially_confirmed UniProt:Q3V5J0_CAEEL protein_id:ABA00174.1| [wormORF-contam.fasta]
  • Hypothetical protein Y95B8A.12b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Y95B8A.12b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE39077 WBGene00022391 status:Partially_confirmed UniProt:Q3V5J0 protein_id:ABA00174.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE39077 WBGene00022391 status:Partially_confirmed UniProt:H2L0P4 protein_id:CCD73548.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Isoform of H2L0P5, Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_Y95B8A.12 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 613 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: regulation of Rho protein signal transduction [IEALink to PubMed article]
    Molecular Function: Rho guanyl-nucleotide exchange factor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDLQLFTPL IRYSEPEEGE PQTIHPNKEQ LSRRHAIIPD QPSENQETSS QGCCSSDNVI  60
   61 IVPHVQISPN ESHLFNRAIS SGGGLLADLQ RATIASQAFY AEASEPQKNR SPWILKRLYE 120
  121 WSGRAKRREI IKHVQAALET SKDHEIEDDE LEKLLPVSFE EMFMGDETTT IPSSKHKYLQ 180
  181 AVWELFHTEL VFLYRQLFVL RDVYKEPLKR CQVEGCLLLV EPDLLFGNLD QLCRISRTFC 240
  241 QSFLSLLSTV DKENWDCTQL VVDLFERFSK GPSTISAYQA YCINYKATME YLGSIRQKEE 300
  301 RFTEFERICL ADERCFRLQL EDLLIAPLQR ITRLPILLRE IHKRSEEEES KGKVEKVIDT 360
  361 MTESLRSIDD SVQWLHNFER LQQLQTQVVW PNISDLEPKS YVPDFLRVAL SRQFCENLLA 420
  421 HPRRKLIHEG PLELVENGRT VDMYAFLFND MFVLTKTKKC ASKLKVKGVP IGKSEHYIVQ 480
  481 RQPVPLDSCV FCDADSNDQA TPMSLKFAFV IIHLTRYYQV VGIYTLQAAD KADKELWIEK 540
  541 FQESIENYES IQLKDMLKCT PLFSSLSLRR CSSSRLMSKS ESNSPQLPKE KEKEKEEKKE 600
  601 CCSSSTCNNQ APP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..73] deduced N/A No confident structure predictions are available.
    2 View Details [74..613] PSI-BLAST 59.30103 No description for 2pz1A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle