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Protein Overview: rpb-3

General Information:
Name(s) found: rpb-3 / CE39091 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00007971 locus:rpb-3 status:Partially_confirmed UniProt:Q93338 protein_id:CAB02268.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 282 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    transcription [IEALink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    gastrulation with mouth forming first [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: DNA-directed RNA polymerase activity [IEALink to PubMed article]
    protein dimerization activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPYANQPNIE VTELTNDIIK FVLWDTDLSV ANSLRRVFMA EVPTIAIDWV QIETNTSVLH  60
   61 DEFIAHRMGL IPFISDYHVE KMQYTRDCEC AEFCDECSIP FILQMKCKDE ATLAVTTEHL 120
  121 MPMHNLDTTV RPACGKALRE RGSTRDEFHN REEILIVKLR KGQELNLKAY VKKGFGKEHA 180
  181 KWNPTCGVAF EYDPDNALRH TIYPNVEEWP RSDHSSLPED STEKEAPFEP DNKPNKFWFS 240
  241 IEGTGALPAQ RIVTMGIGIL KRKLEELNMA LSNELQAHAQ QQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..282] PSI-BLAST 56.045757 RPB3


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle