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Protein Overview: cogc-1

General Information:
Name(s) found: cogc-1 / CE39656 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00003258 locus:cogc-1 status:Partially_confirmed UniProt:G5EE66 protein_id:CCD72819.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 787 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: vulval development [IMPLink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    morphogenesis of an epithelium [IMPLink to PubMed articleLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    locomotion [IMPLink to PubMed article]
    gonad morphogenesis [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    regulation of cell migration [IMPLink to PubMed article]
    hermaphrodite genitalia morphogenesis [IMPLink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVDRLMRDL SVEQLENIQQ NLEKEMEGKR ESLREMVGRR YRDVLEASSE VRHVCSLADK  60
   61 LASDIANTRV GYQSTHVRTG GREEQKAGEH LYAVNYLVSS IGGDSGEPLD DVVALCMVEH 120
  121 LQKQLISNHS SPMIHKNARA LTNRIVATRS ELEFQNCSTL LDISRSDWAT NQLAAIALLQ 180
  181 GKDISQLLEL YLEKRFEHVT HLIEDSATIL NIVDEMKKTL AVVEELFVHG ELIHAIHSVC 240
  241 NGQYKCELIR EMCADQAYSF EKTINEDMDR VWRHLREKLS GRGAGTLPSQ LVGEKCAAWI 300
  301 EKTCAVTHKL VAEVCEYFDN LDQIIDLLQA ITASLKQDWP RIGSNRSVYD KLLQTAVVDK 360
  361 AKILLIQMIE SIELFAKKRF ESTSDGPQTA IFDERTYHPD SQSHIGISTQ LYNCVKTLWE 420
  421 SLEQTNEKCA QFETICTPMA DMATSNALKE TMATNVLQLL LRLCELHSDK QEGSARFLAR 480
  481 ARLALALVHS ESTLICKLLD KDSQRITSLN QRLHSIIEKN LGDFCEVVVD EHITVASLSE 540
  541 YLESFEGGMY ALRLVMEFQT VDLPDVGEVT VPIALSPPLQ SILFDISSCL AEASVAHLLT 600
  601 KKIRKRLDEH VSHRMAQLIG ERVEELKDSW HLPSRSTLQV LFDCQLIGAM FPSERMRSVC 660
  661 SSIESHLDPF DVSLLSPLLA ANVKLVYTRT QVLFSCLVAD TLSSKEVQLP QSFSKIQDVS 720
  721 VHIEQPSRIP MVPRLDRTMN GDKKNGGARL KNNKYLANPQ QGSSKSTPSL SAFYDRISSS 780
  781 WFGGANN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..79] Pfam 4.920819 No description for PF08700.2 was found. No confident structure predictions are available.
    2 View Details [80..264] deduced N/A No confident structure predictions are available.
    3 View Details [265..521] deduced N/A No confident structure predictions are available.
    4 View Details [522..787] MSA 1.028973 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle