| Protein: | cogc-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 787 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cogc-1.
| Description | E-value | Query Range |
Subject Range |
|
|
776.0 | [0..2] | [717..17] |
|
Region A: Residues: [1-79] |
1 11 21 31 41 51
| | | | | |
1 MDVDRLMRDL SVEQLENIQQ NLEKEMEGKR ESLREMVGRR YRDVLEASSE VRHVCSLADK 60
61 LASDIANTRV GYQSTHVRT
|
| Detection Method: |  |
| Confidence: | 4.920819 |
| Match: | PF08700.2 |
| Description: | No description for PF08700.2 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [80-264] |
1 11 21 31 41 51
| | | | | |
1 GGREEQKAGE HLYAVNYLVS SIGGDSGEPL DDVVALCMVE HLQKQLISNH SSPMIHKNAR 60
61 ALTNRIVATR SELEFQNCST LLDISRSDWA TNQLAAIALL QGKDISQLLE LYLEKRFEHV 120
121 THLIEDSATI LNIVDEMKKT LAVVEELFVH GELIHAIHSV CNGQYKCELI REMCADQAYS 180
181 FEKTI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [265-521] |
1 11 21 31 41 51
| | | | | |
1 NEDMDRVWRH LREKLSGRGA GTLPSQLVGE KCAAWIEKTC AVTHKLVAEV CEYFDNLDQI 60
61 IDLLQAITAS LKQDWPRIGS NRSVYDKLLQ TAVVDKAKIL LIQMIESIEL FAKKRFESTS 120
121 DGPQTAIFDE RTYHPDSQSH IGISTQLYNC VKTLWESLEQ TNEKCAQFET ICTPMADMAT 180
181 SNALKETMAT NVLQLLLRLC ELHSDKQEGS ARFLARARLA LALVHSESTL ICKLLDKDSQ 240
241 RITSLNQRLH SIIEKNL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [522-787] |
1 11 21 31 41 51
| | | | | |
1 GDFCEVVVDE HITVASLSEY LESFEGGMYA LRLVMEFQTV DLPDVGEVTV PIALSPPLQS 60
61 ILFDISSCLA EASVAHLLTK KIRKRLDEHV SHRMAQLIGE RVEELKDSWH LPSRSTLQVL 120
121 FDCQLIGAMF PSERMRSVCS SIESHLDPFD VSLLSPLLAA NVKLVYTRTQ VLFSCLVADT 180
181 LSSKEVQLPQ SFSKIQDVSV HIEQPSRIPM VPRLDRTMNG DKKNGGARLK NNKYLANPQQ 240
241 GSSKSTPSLS AFYDRISSSW FGGANN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
