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Protein Overview: RPA1393

General Information:
Name(s) found: RPA1393 [rpal_3_plus_contams.fasta]
Description(s) found:
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  • gi|39934467|ref|NP_946743.1| hypothetical protein RPA1393 [Rhodopseudomonas palustris CGA009] [NCBI NR]
  • gi|39648316|emb|CAE26836.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] [NCBI NR]
  • conserved hypothetical protein [Rhodopseudomonas palustris CGA009]gi|39934467|ref|NP_946743.1| hypothetical protein RPA1393 [Rhodopseudomonas palustris CGA009] [nrdb_11152004_Chlamydomonas]
  • RPA1393 conserved hypothetical protein 1538532:1539338 forward MW:30728 [rpal_3_plus_contams.fasta]
  • conserved hypothetical protein [Rhodopseudomonas palustris CGA009] [nr-271106-contam.fasta]
  • hypothetical protein RPA1393 [Rhodopseudomonas palustris CGA009] [nr-271106-contam.fasta]
    • Organism: Rhodopseudomonas palustris CGA009
    Length: 268 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFAHSVARY RSKWSRHLSQ NGSEPLARNP IKRDISQWNW SSAEMTTADT NKPAEPPTER  60
   61 TRLKRYHWLA KYDQETINAI IDAGIVCQIG YVIDSQPYVT PTNHWRIDDY VYWHGSSASR 120
  121 MLKEQQRGIP VCFTVTHLDG IVFSRAAFNH NINFRSVMAF GHGELCDEEL KREALQVFVD 180
  181 RLAPGLWDYA RKPTDQEWKA SKVIRMKLDE VSAKVSDGLP DEEPEDLASN LWAGSIGLQL 240
  241 VQAPPVPDPK LRPGIDMPDF VKNFKYSR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..268] PSI-BLAST 40.0 Crystal structure of hypothetical protein 10640715 from Thermoplasma acidophilum at 1.80 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.130848055218245 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle