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Protein Overview: CG17883-PA

General Information:
Name(s) found: CG17883-PA / FBpp0110549 [FlyBase]
Description(s) found:
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  • gi|62862620|ref|NP_001015457.1| CG17883-PC.3 [Drosophila melanogaster] [NCBI NR]
  • gi|62862618|ref|NP_001015456.1| CG17883-PA.3 [Drosophila melanogaster] [NCBI NR]
  • gi|51951001|gb|EAL24541.1| CG17883-PC.3 [Drosophila melanogaster] [NCBI NR]
  • gi|51951000|gb|EAA45988.2| CG17883, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|21064591|gb|AAM29525.1| RE60063p [Drosophila melanogaster] [NCBI NR]
  • gi|116007504|ref|NP_001036448.1| CG17883, isoform A [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG17883 (CG17883, FBgn0040005). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:559362..561145. It has the cytological map location 41B3. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: Rab GTPase activator activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: regulation of Rab GTPase activity. One allele is reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • (AE003279) CG17883 gene product [alt 1] [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG17883-PC.3 [Drosophila melanogaster]gi|51951000|gb|EAA45988.2| CG17883-PA.3 [Drosophila melanogaster]gi|21064591|gb|AAM29525.1| RE60063p [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:join(559685..559724,559783..560567,560619..560728,560782..560983); ID=FBpp0110549; name=CG17883-PA; parent=FBgn0040005,FBtr0111291; dbxref=FlyBase_Annotation_IDs:CG17883-PA,GB_protein:EAA45988.1,FlyBase:FBpp0110549,REFSEQ:NP_001036448 [fly-100309-contam.fasta]
  • CG17883-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • RE60063p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:join(559685..559724,559783..560567,560619..560728,560782..560983); ID=FBpp0110549; name=CG17883-PA; parent=FBgn0040005,FBtr0111291; dbxref=FlyBase_Annotation_IDs:CG17883-PA,GB_protein:EAA45988.1,FlyBase:FBpp0110549,REFSEQ:NP_001036448,GB_protein:EAA45988; MD5=7b31051f5c85519bb9699fae9981f434; length=378; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:join(559685..559724,559783..560567,560619..560728,560782..560983); ID=FBpp0110549; name=CG17883-PA; parent=FBgn0040005,FBtr0111291; dbxref=FlyBase_Annotation_IDs:CG17883-PA,GB_protein:EAA45988.1,FlyBase:FBpp0110549,REFSEQ:NP_001036448,GB_protein:EAA45988; MD5=7b31051f5c85519bb9699fae9981f434; length=378; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG17883, isoform A OS=Drosophila melanogaster GN=CG17883 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:join(559685..559724,559783..560567,560619..560728,560782..560983); ID=FBpp0110549; name=CG17883-PA; parent=FBgn0040005,FBtr0111291; dbxref=FlyBase_Annotation_IDs:CG17883-PA,GB_protein:EAA45988.1,FlyBase:FBpp0110549,REFSEQ:NP_001036448,GB_protein:EAA45988,FlyMine:FBpp0110549,modMine:FBpp0110549; MD5=7b31051f5c85519bb9699fae9981f434; length=378; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:join(4672180..4672219,4672278..4673062,4673114..4673223,4673277..4673478); ID=FBpp0110549; name=CG17883-PA; parent=FBgn0040005,FBtr0111291; dbxref=FlyBase_Annotation_IDs:CG17883-PA,GB_protein:EAA45988.1,FlyBase:FBpp0110549,REFSEQ:NP_001036448,GB_protein:EAA45988,FlyMine:FBpp0110549,modMine:FBpp0110549; MD5=7b31051f5c85519bb9699fae9981f434; length=378; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(4672180..4672219,4672278..4673062,4673114..4673223,4673277..4673478); ID=FBpp0110549; name=CG17883-PA; parent=FBgn0040005,FBtr0111291; dbxref=FlyBase_Annotation_IDs:CG17883-PA,GB_protein:EAA45988.1,FlyBase:FBpp0110549,REFSEQ:NP_001036448,GB_protein:EAA45988,FlyMine:FBpp0110549,modMine:FBpp0110549; MD5=7b31051f5c85519bb9699fae9981f434; length=378; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • CG17883, isoform A OS=Drosophila melanogaster GN=CG17883 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0110549 type=protein; loc=2R:join(4672180..4672219,4672278..4673062,4673114..4673223,4673277..4673478); ID=FBpp0110549; name=CG17883-PA; parent=FBgn0040005,FBtr0111291; dbxref=FlyBase_Annotation_IDs:CG17883-PA,GB_protein:EAA45988.1,FlyBase:FBpp0110549,REFSEQ:NP_001036448,GB_protein:EAA45988,FlyMine:FBpp0110549,modMine:FBpp0110549; MD5=7b31051f5c85519bb9699fae9981f434; length=378; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:join(4672180..4672219,4672278..4673062,4673114..4673223,4673277..4673478); ID=FBpp0110549; name=CG17883-PA; parent=FBgn0040005,FBtr0111291; dbxref=FlyBase_Annotation_IDs:CG17883-PA,GB_protein:EAA45988.1,FlyBase:FBpp0110549,REFSEQ:NP_001036448,GB_protein:EAA45988,UniProt/TrEMBL:Q9W5H8,FlyMine:FBpp0110549,modMine:FBpp0110549; MD5=7b31051f5c85519bb9699fae9981f434; length=378; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 378 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: regulation of Rab GTPase activity [IEA]
    Molecular Function: Rab GTPase activator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKNEQRPLN FEKCPESDDE LKKRLEIEKL INKNIDKNIS FDVLVKLSLA PYGLVNDDFR  60
   61 RILWPQLAGV DINHLGQAPT LDKFQCHPEY NQVVLDVNRS LKRFPPGIPY EQRIALQDQL 120
  121 TVLILRVIQK YPNLRYYQGY HDVAVTFLLV VGEEIAFAIM EQLSTTHFSE CMQETMEATQ 180
  181 RRLMFIWPII KFENPELYQF LQNSTVGTLF SLPWYLTWFG HSLTSYRTVV RLYDYFLASP 240
  241 IYTSIFVTAA ILLYRSDEIL KEDCDMASVH CLLSVIPEDL PFEDLLKTSS SLLNKYSLTL 300
  301 IEKDVEELIC QERRKRKTDE ALIVKRRQPA TSNRIPIITK WLPNILTAKP VILTTAISIV 360
  361 VGVCAYYYNN QYLAAGIS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..378] PSI-BLAST 44.154902 No description for 2qq8A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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