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Protein Overview: gi|55640643

General Information:
Name(s) found: gi|55640643 [NCBI NR]
Description(s) found:
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  • gi|55640643|ref|XP_509917.1| PREDICTED: SMN-interacting protein 1 isoform 5 [Pan troglodytes] [NCBI NR]
  • PREDICTED: similar to survival of motor neuron protein interacting protein 1 [Pan troglodytes]gi|4506961|ref|NP_003607.1| survival of motor neuron protein interacting protein 1 [Homo sapiens]gi|6094289|sp|O14893|GEM2_HUMAN Survival of motor neuron prote [nrdb_11152004_Chlamydomonas]
  • [chimp_Ens_120109_contam.fas]
  • PREDICTED: SMN-interacting protein 1 isoform 5 [Pan troglodytes] [nr-271106-contam.fasta]
    • Organism: Pan troglodytes
    Length: 280 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRAELAGLK TMAWVPAESA VEELMPRLLP VEPCDLTEGF DPSVPPRTPQ EYLRRVQIEA  60
   61 AQCPDVVVAQ IDPKKLKRKQ SVNISLSGCQ PAPEGYSPTL QWQQQQVAQF STVRQNVNKH 120
  121 RSHWKSQQLD SNVTMPKSED EEGWKKFCLG EKLCADGAVG PATNESPGID YVQIGFPPLL 180
  181 SIVSRMNQAT VTSVLEYLSN WFGERDFTPE LGRWLYALLA CLEKPLLPEA HSLIRQLARR 240
  241 CSEVRLLVDS KDDERVPALN LLICLVSRYF DQRDLADEPS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..280] MSA 4.026995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.56

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle