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Protein Overview: NFYC2_ARATH

General Information:
Name(s) found: NFYC2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|84029365|sp|Q8LCG7.2|NFYC2_ARATH RecName: Full=Nuclear transcription factor Y subunit C-2; Short=AtNF-YC-2; AltName: Full=Transcriptional activator HAP5B [NCBI NR]
  • gi|21389649|gb|AAM48023.1| putative transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|18252953|gb|AAL62403.1| transcription factor, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|15223482|ref|NP_176013.1| NF-YC2 (NUCLEAR FACTOR Y, SUBUNIT C2); DNA binding / transcription activator/ transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|145325443|ref|NP_001077726.1| NF-YC2 (NUCLEAR FACTOR Y, SUBUNIT C2); DNA binding / transcription activator/ transcription factor [Arabidopsis thaliana] [NCBI NR]
  • Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana GN=NFYC2 PE=2 SV=2 [Swiss-Prot]
  • putative transcription factor [Arabidopsis thaliana]gi|18252953|gb|AAL62403.1| transcription factor, putative [Arabidopsis thaliana]gi|15223482|ref|NP_176013.1| transcription factor, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Transcription factor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATHAP5B, HAP5B | HAP5B (Heme activator protein (yeast) homolog 5B); DNA binding / transcription factor | chr1:21028783-21029382 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • | Symbols: ATHAP5B, HAP5B | HAP5B (Heme activator protein (yeast) homolog 5B) | chr1:21028783-21029382 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Nuclear transcription factor Y subunit C-2 (AtNF-YC-2) (Transcriptional activator HAP5B) [nr-271106-contam.fasta]
  • HAP5B; DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • transcription factor, putative [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: HAP5B, ATHAP5B, NF-YC2 | nuclear factor Y, subunit C2 | chr1:21025118-21025717 FORWARD LENGTH=199 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 199 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA][ISS]
    CCAAT-binding factor complex [ISS]
    cytoplasm [IDA]
    Biological Process: positive regulation of gene-specific transcription [IDA]
    regulation of transcription, DNA-dependent [ISS]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]
    transcription activator activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQSEEGQQQ QQQGVMDYVP PHAYQSGPVN AASHMAFQQA HHFHHHHQQQ QQQQLQMFWA  60
   61 NQMQEIEHTT DFKNHTLPLA RIKKIMKADE DVRMISAEAP VIFAKACEMF ILELTLRAWI 120
  121 HTEENKRRTL QKNDIAAAIS RTDVFDFLVD IIPRDELKEE GLGVTKGTIP SVVGSPPYYY 180
  181 LQQQGMMQHW PQEQHPDES

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..199] PSI-BLAST 19.522879 Nuclear transcription factor Y subunit gamma (Nf-Yc2)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.581886805340955 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle