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Protein Overview: RH39_ARATH

General Information:
Name(s) found: RH39_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana GN=RH39 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 621 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: NONE FOUND
    Molecular Function: nucleic acid binding [IEA]
    ATP binding [IEA]
    ATP-dependent helicase activity [IEA][ISS]
    helicase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGASRTILS LSLSSSLFTF SKIPHVFPFL RLHKPRFHHA FRPLYSAAAT TSSPTTETNV  60
   61 TDPDQLKHTI LLERLRLRHL KESAKPPQQR PSSVVGVEEE SSIRKKSKKL VENFQELGLS 120
  121 EEVMGALQEL NIEVPTEIQC IGIPAVMERK SVVLGSHTGS GKTLAYLLPI VQLMREDEAN 180
  181 LGKKTKPRRP RTVVLCPTRE LSEQVYRVAK SISHHARFRS ILVSGGSRIR PQEDSLNNAI 240
  241 DMVVGTPGRI LQHIEEGNMV YGDIAYLVLD EADTMFDRGF GPEIRKFLAP LNQRALKTND 300
  301 QGFQTVLVTA TMTMAVQKLV DEEFQGIEHL RTSTLHKKIA NARHDFIKLS GGEDKLEALL 360
  361 QVLEPSLAKG SKVMVFCNTL NSSRAVDHYL SENQISTVNY HGEVPAEQRV ENLKKFKDEE 420
  421 GDCPTLVCTD LAARGLDLDV DHVVMFDFPK NSIDYLHRTG RTARMGAKGK VTSLVSRKDQ 480
  481 MLAARIEEAM RNNESLESLT TDNVRRDAAR THITQEKGRS VKQIREVSKQ RNSRDKPSSS 540
  541 SPPARSTGGK TPVRKSSSSS FSKPRKASSP PEKSSKPKRK ILKTVGSRSI AARGKTGSDR 600
  601 RPGKKLSVVG FRGKSSSARA S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..111] deduced N/A No confident structure predictions are available.
    2 View Details [112..498] PSI-BLAST 92.39794 No description for 2i4iA was found.
    3 View Details [499..621] PSI-BLAST 18.221849 Nucleotide excision repair enzyme UvrB


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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