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Protein Overview: gi|30686199, gi|...

General Information:
Name(s) found: gi|30686199 [NCBI NR]
gi|23296957 [NCBI NR]
gi|20465617 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|30686199|ref|NP_850236.1| RNA polymerase I specific transcription initiation factor RRN3 family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|23296957|gb|AAN13210.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20465617|gb|AAM20140.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 613 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: RNA polymerase I transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAVELMSDP SSLCTVENYV DNVDLSDTQL VQTVRKALTS VKTGDSDLYS EMVGVMARDI  60
   61 KEFKDPDVVA QLETVLKALS GAVACIDVLH HQKLLSALFR MKLWDHRPDV MDALVNLVIS 120
  121 LAVTSGKYLD SCLNMLVSNF VPPPWVVNNL SHSRILNKKI DVLSRVHAAL LKISILVPLT 180
  181 PSRLVPMLFQ QMPKMHKKDH SIVIYVESLL KLENSSIGQV GGSMILGMVM ERLRDLDLEI 240
  241 EWDDIPQDDS SRGMFDMELE DAAEGTMNDG DELPVGPLKQ DTSDGSIVSK LLDKLMVVAF 300
  301 EHLESCQNDG RLDQVFESLF KSFENFILNT YKSKFTQFLI FYACSLDPEN CGVKFASKLV 360
  361 EIFLSSNKHV ATRMSAVAYL ASFLARGKFL PVSFVASMLK RLIDECVGYC RTCNDDTRPE 420
  421 AHQIFFSGCQ AIMYVLCFRM RSILDVPRFR SQLTPLESIL MHKLNPLMVC LPSVVAEFLR 480
  481 QAKEGGLFIV SDSFIFDDLL ESELSRAFGG FERLDTFFPF DPCLLKSSNS FISPNFIYWS 540
  541 MVKATYDEDD DDNDAEVIVN GDEDSDEDDE ADLDYALNKM SITPKHSFKN KMERDRLLRM 600
  601 PSRIRPSTSP ESL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..121] MSA 2.036995 View MSA. Confident ab initio structure predictions are available.
    2 View Details [122..244] deduced N/A No confident structure predictions are available.
    3 View Details [245..445] MSA 2.051972 View MSA. No confident structure predictions are available.
    4 View Details [446..613] MSA 1.049978 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle