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Protein Overview: SYYC1_ARATH

General Information:
Name(s) found: SYYC1_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Tyrosine--tRNA ligase 1, cytoplasmic OS=Arabidopsis thaliana GN=At2g33840 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 385 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEA]
    Biological Process: tRNA aminoacylation for protein translation [IEA][ISS]
    tyrosyl-tRNA aminoacylation [IEA]
    translation [IEA]
    Molecular Function: nucleotide binding [IEA]
    ATP binding [IEA][ISS]
    tyrosine-tRNA ligase activity [IEA]
    aminoacyl-tRNA ligase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADQSSEIVN ALSSEMEAVS VSSTQASSSS DGFQMSEEVE KRYKIVRSIG EECIQEEELK  60
   61 NLLAKKAAPI CYDGFEPSGR MHIAQGVMKV INVNKMTSAG CRVKIWIADW FAQLNNKMGG 120
  121 DLKKIRVVGE YFQEIWKAAG MDNDKVEFLW SSEEINSKAD KYWPLVMDIA RKNKLPRILR 180
  181 CVQIMGRSET DELSAAQILY PCMQCADIFF LEADICQLGM DQRKVNVLAR EYCDDIKRKN 240
  241 KPIILSHHML PGLQQGQEKM SKSDPLSAIF MEDEEAEVNV KIKKAYCPPK VVKGNPCLEY 300
  301 IKYIILPWFD EFTVERNEEY GGNKTYKSFE DIAADYESGE LHPGDLKKGL MNALNKILQP 360
  361 VRDHFKTDAR AKNLLKQIKA YRVTR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..385] PSI-BLAST 54.522879 No description for 2j5bA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle