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Protein Overview: DPS_ECOLI

General Information:
Name(s) found: DPS_ECOLI [Swiss-Prot]
Description(s) found:
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  • gi|78100046|sp|P0ABT2.2|DPS_ECOLI RecName: Full=DNA protection during starvation protein [NCBI NR]
  • pir||A46401 DNA-binding protein, starvation-inducible - Escherichia coli (strain K-12) [NCBI NR]
  • gi|4704834|gb|AAD28292.1|AF140030_1 DNA binding protein Dps [Escherichia coli] [NCBI NR]
  • gi|41295|emb|CAA49169.1| DPS [Escherichia coli] [NCBI NR]
  • gi|33356902|pdb|1F33|L Chain L, The Structural Basis For Dna Protection By E. Coli Dps Protein [NCBI NR]
  • gi|33356901|pdb|1F33|K Chain K, The Structural Basis For Dna Protection By E. Coli Dps Protein [NCBI NR]
  • gi|33356900|pdb|1F33|J Chain J, The Structural Basis For Dna Protection By E. Coli Dps Protein [NCBI NR]
  • gi|33356899|pdb|1F33|I Chain I, The Structural Basis For Dna Protection By E. Coli Dps Protein [NCBI NR]
  • gi|33356898|pdb|1F33|H Chain H, The Structural Basis For Dna Protection By E. Coli Dps Protein [NCBI NR]
  • gi|33356897|pdb|1F33|G Chain G, The Structural Basis For Dna Protection By E. Coli Dps Protein [NCBI NR]
  • gi|33356896|pdb|1F33|F Chain F, The Structural Basis For Dna Protection By E. Coli Dps Protein [NCBI NR]
  • gi|33356895|pdb|1F33|E Chain E, The Structural Basis For Dna Protection By E. Coli Dps Protein [NCBI NR]
  • gi|33356894|pdb|1F33|D Chain D, The Structural Basis For Dna Protection By E. Coli Dps Protein [NCBI NR]
  • gi|33356893|pdb|1F33|C Chain C, The Structural Basis For Dna Protection By E. Coli Dps Protein [NCBI NR]
  • gi|33356892|pdb|1F33|B Chain B, The Structural Basis For Dna Protection By E. Coli Dps Protein [NCBI NR]
  • gi|33356891|pdb|1F33|A Chain A, The Structural Basis For Dna Protection By E. Coli Dps Protein [NCBI NR]
  • gi|33356890|pdb|1F30|L Chain L, The Structural Basis For Dna Protection By E. Coli Dps Protein [NCBI NR]
  • gi|33356889|pdb|1F30|K Chain K, The Structural Basis For Dna Protection By E. Coli Dps Protein [NCBI NR]
  • gi|33356888|pdb|1F30|J Chain J, The Structural Basis For Dna Protection By E. Coli Dps Protein [NCBI NR]
  • gi|33356887|pdb|1F30|I Chain I, The Structural Basis For Dna Protection By E. Coli Dps Protein [NCBI NR]
  • gi|33356886|pdb|1F30|H Chain H, The Structural Basis For Dna Protection By E. Coli Dps Protein [NCBI NR]
  • gi|33356885|pdb|1F30|G Chain G, The Structural Basis For Dna Protection By E. Coli Dps Protein [NCBI NR]
  • gi|33356884|pdb|1F30|F Chain F, The Structural Basis For Dna Protection By E. Coli Dps Protein [NCBI NR]
  • gi|33356883|pdb|1F30|E Chain E, The Structural Basis For Dna Protection By E. Coli Dps Protein [NCBI NR]
  • gi|33356882|pdb|1F30|D Chain D, The Structural Basis For Dna Protection By E. Coli Dps Protein [NCBI NR]
  • gi|33356881|pdb|1F30|C Chain C, The Structural Basis For Dna Protection By E. Coli Dps Protein [NCBI NR]
  • gi|33356880|pdb|1F30|B Chain B, The Structural Basis For Dna Protection By E. Coli Dps Protein [NCBI NR]
  • gi|33356879|pdb|1F30|A Chain A, The Structural Basis For Dna Protection By E. Coli Dps Protein [NCBI NR]
  • pir||D85590 global regulator, starvation conditions [imported] - Escherichia coli (strain O157:H7, substrain EDL933) [NCBI NR]
  • pir||B90740 global regulator protein Dps [imported] - Escherichia coli (strain O157:H7, substrain RIMD 0509952) [NCBI NR]
  • gi|209775786|gb|ACI86205.1| global regulator protein Dps [Escherichia coli] [NCBI NR]
  • gi|209775784|gb|ACI86204.1| global regulator protein Dps [Escherichia coli] [NCBI NR]
  • gi|209775782|gb|ACI86203.1| global regulator protein Dps [Escherichia coli] [NCBI NR]
  • gi|209775780|gb|ACI86202.1| global regulator protein Dps [Escherichia coli] [NCBI NR]
  • gi|209775778|gb|ACI86201.1| global regulator protein Dps [Escherichia coli] [NCBI NR]
  • DNA protection during starvation protein (EC 1.16.-.-) - Escherichia coli [Swiss-Prot]
  • global regulator, starvation conditions; stress response DNA-binding protein; starvation-induced resistance to H2O2, ferritin-like [Escherichia coli K12]gi|15830144|ref|NP_308917.1| Dps; global regulator protein [Escherichia coli O157:H7]gi|30062296|ref [nrdb_11152004_Chlamydomonas]
  • DNA protection during starvation protein [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • Chain J, The Structural Basis For Dna Protection By E. Coli Dps Protein [nr-271106-contam.fasta]
  • Chain H, The Structural Basis For Dna Protection By E. Coli Dps Protein [nr-271106-contam.fasta]
  • Chain L, The Structural Basis For Dna Protection By E. Coli Dps Protein [nr-271106-contam.fasta]
  • Chain A, The Structural Basis For Dna Protection By E. Coli Dps Protein [nr-271106-contam.fasta]
  • Chain F, The Structural Basis For Dna Protection By E. Coli Dps Protein [nr-271106-contam.fasta]
  • Chain I, The Structural Basis For Dna Protection By E. Coli Dps Protein [nr-271106-contam.fasta]
  • Chain K, The Structural Basis For Dna Protection By E. Coli Dps Protein [nr-271106-contam.fasta]
  • Chain D, The Structural Basis For Dna Protection By E. Coli Dps Protein [nr-271106-contam.fasta]
  • Chain E, The Structural Basis For Dna Protection By E. Coli Dps Protein [nr-271106-contam.fasta]
  • Chain C, The Structural Basis For Dna Protection By E. Coli Dps Protein [nr-271106-contam.fasta]
  • DNA binding protein Dps [Escherichia coli] [nr-271106-contam.fasta]
  • Chain B, The Structural Basis For Dna Protection By E. Coli Dps Protein [nr-271106-contam.fasta]
  • Chain G, The Structural Basis For Dna Protection By E. Coli Dps Protein [nr-271106-contam.fasta]
  • DNA protection during starvation protein OS=Escherichia coli (strain K12) GN=dps PE=1 SV=2 [uniprot-Ecoli-reviewed-110511.fasta]
    • Organism: Escherichia coli
    Length: 167 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTAKLVKSK ATNLLYTRND VSDSEKKATV ELLNRQVIQF IDLSLITKQA HWNMRGANFI  60
   61 AVHEMLDGFR TALIDHLDTM AERAVQLGGV ALGTTQVINS KTPLKSYPLD IHNVQDHLKE 120
  121 LADRYAIVAN DVRKAIGEAK DDDTADILTA ASRDLDKFLW FIESNIE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..167] PSI-BLAST 30.221849 Dodecameric ferritin homolog

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.19368678835393 bayes_pls_golite062009
  • superoxide dismutase activity
    		•  1.09380928995205 bayes_pls_golite062009
  • oxidoreductase activity, acting on superoxide radicals as acceptor
    		•  1.09380928995205 bayes_pls_golite062009
  • iron ion binding
    		•  0.947885019777229 bayes_pls_golite062009
  • catalytic activity
    		•  0.197328811494233 bayes_pls_golite062009
  • protein binding
    		•  0.0527791762420279 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle