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Protein Overview: SPEA_BACSU

General Information:
Name(s) found: SPEA_BACSU [Swiss-Prot]
Description(s) found:
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  • gi|2633834|emb|CAB13336.1| arginine decarboxylase [Bacillus subtilis subsp. subtilis str. 168] [NCBI NR]
  • gi|221309333|ref|ZP_03591180.1| arginine decarboxylase [Bacillus subtilis subsp. subtilis str. 168] [NCBI NR]
  • gi|16078527|ref|NP_389346.1| arginine decarboxylase [Bacillus subtilis subsp. subtilis str. 168] [NCBI NR]
  • Arginine decarboxylase OS=Bacillus subtilis (strain 168) GN=speA PE=1 SV=2 [Swiss-Prot]
  • arginine decarboxylase [Bacillus subtilis subsp. subtilis str. 168]gi|580835|emb|CAA41337.1| lysine decarboxylase [Bacillus subtilis]gi|2633834|emb|CAB13336.1| arginine decarboxylase [Bacillus subtilis subsp. subtilis str. 168]gi|3282147|gb|AAC24937.1| [nrdb_11152004_Chlamydomonas]
  • arginine decarboxylase [Bacillus subtilis subsp. subtilis str. 168] [nr-271106-contam.fasta]
    • Organism: Bacillus subtilis subsp. subtilis str. 168
    Length: 490 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQHETPLYT GLKKHASRQP VQFHIPGHKK GAGMDPEFRQ FIGENALSID LINIEPLDDL  60
   61 HAPKGIIKQA QDLAAEAFGA DHTFFSVQGT SGAIMTMVMA VCGPGDKIII PRNVHKSIMT 120
  121 AIVFSGAVPI FIHPEIDNEL GISHGITLES AKRALTEHPD AKGLLVINPT YFGVAADLKS 180
  181 IVELAHSFDV PVLVDEAHGV HIHFHDELPL SAMQAGADIA ATSVHKLGGS LTQSSILNMR 240
  241 EGLVSKDRVQ SILSMLTTTS TSYLLLASLD VARKRLATEG RQLAEETLKL ANQTRDRLNQ 300
  301 IEGIYCVGSE ILGSKAAYSY DPTKLIISVK SLGLTGHDVE KWLRESFNIE VELSDLYNIL 360
  361 CIFTPGDSQN DADRLVEALT EIAQQMSEQD VTHQQTEVLL PEIPLLAMTP RDAFYANTEV 420
  421 IPLKEASGRI IAEFVMVYPP GIPIFIPGEI ITEENISYIF KNLDAGLPVQ GPEDSTLHMI 480
  481 RVIKEQKAIQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..490] PSI-BLAST 55.69897 Ornithine decarboxylase N-terminal "wing" domain; Ornithine decarboxylase major domain; Ornithine decarboxylase C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.66922865456094 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  1.85532625717753 bayes_pls_golite062009
  • transaminase activity
    		•  1.83482013760414 bayes_pls_golite062009
  • transferase activity
    		•  0.93810038069762 bayes_pls_golite062009
  • glycine dehydrogenase (decarboxylating) activity
    		•  0.520614909745139 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  0.520614909745139 bayes_pls_golite062009
  • lyase activity
    		•  0.0414385380659299 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.64

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle