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Protein Overview: gi|385477

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..331] PSI-BLAST 106.0 Rab geranylgeranyltransferase, beta subunit

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • protein prenyltransferase activity
  • 13.7736019666673 bayes_pls_golite062009
  • protein geranylgeranyltransferase activity
  • 12.9757276506747 bayes_pls_golite062009
  • Rab geranylgeranyltransferase activity
  • 12.8088011327065 bayes_pls_golite062009
  • prenyltransferase activity
  • 11.6786310564018 bayes_pls_golite062009
  • protein farnesyltransferase activity
  • 4.15546866363415 bayes_pls_golite062009
  • CAAX-protein geranylgeranyltransferase activity
  • 3.9191671794027 bayes_pls_golite062009
  • transferase activity
  • 1.0950430724883 bayes_pls_golite062009
  • binding
  • 1.09280744446864 bayes_pls_golite062009
  • catalytic activity
  • 0.497699107100544 bayes_pls_golite062009
  • protein binding
  • 0.427029962299636 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle