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Protein Overview: ATG4A_ARATH

General Information:
Name(s) found: ATG4A_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Cysteine protease ATG4a OS=Arabidopsis thaliana GN=ATG4A PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 467 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: autophagy [ISS]
    Molecular Function: peptidase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKALCDRFVP QQCSSSSKSD THDKSPLVSD SGPSDNKSKF TLWSNVFTSS SSVSQPYRES  60
   61 STSGHKQVCT TRNGWTAFVK RVSMASGAIR RFQERVLGPN RTGLPSTTSD VWLLGVCYKI 120
  121 SADENSGETD TGTVLAALQL DFSSKILMTY RKGFEPFRDT TYTSDVNWGC MIRSSQMLFA 180
  181 QALLFHRLGR AWTKKSELPE QEYLETLEPF GDSEPSAFSI HNLIIAGASY GLAAGSWVGP 240
  241 YAICRAWESL ACKKRKQTDS KNQTLPMAVH IVSGSEDGER GGAPILCIED ATKSCLEFSK 300
  301 GQSEWTPIIL LVPLVLGLDS VNPRYIPSLV ATFTFPQSVG ILGGKPGAST YIVGVQEDKG 360
  361 FYLDPHEVQQ VVTVNKETPD VDTSSYHCNV LRYVPLESLD PSLALGFYCR DKDDFDDFCL 420
  421 RALKLAEESN GAPLFTVTQT HTAINQSNYG FADDDSEDER EDDWQML

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..105] deduced N/A No confident structure predictions are available.
    2 View Details [106..467] PSI-BLAST 133.0 Structure of human Atg4b


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.71

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle