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Protein Overview: EG10133

General Information:
Name(s) found: cadC / EG10133 [EcoGene]
Description(s) found:
Found 11 descriptions.
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  • cadBA operon transcriptional activator / Transcriptional activator for cadBA, low external pH-, low oxygen-, excess lysine-responsive; homodimeric [EcoGene]
    • Organism: Escherichia coli K-12
    Length: 512 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQPVVRVGE WLVTPSINQI SRNGRQLTLE PRLIDLLVFF AQHSGEVLSR DELIDNVWKR  60
   61 SIVTNHVVTQ SISELRKSLK DNDEDSPVYI ATVPKRGYKL MVPVIWYSEE EGEEIMLSSP 120
  121 PPIPEAVPAT DSPSHSLNIQ NTATPPEQSP VKSKRFTTFW VWFFFLLSLG ICVALVAFSS 180
  181 LDTRLPMSKS RILLNPRDID INMVNKSCNS WSSPYQLSYA IGVGDLVATS LNTFSTFMVH 240
  241 DKINYNIDEP SSSGKTLSIA FVNQRQYRAQ QCFMSIKLVD NADGSTMLDK RYVITNGNQL 300
  301 AIQNDLLESL SKALNQPWPQ RMQETLQKIL PHRGALLTNF YQAHDYLLHG DDKSLNRASE 360
  361 LLGEIVQSSP EFTYARAEKA LVDIVRHSQH PLDEKQLAAL NTEIDNIVTL PELNNLSIIY 420
  421 QIKAVSALVK GKTDESYQAI NTGIDLEMSW LNYVLLGKVY EMKGMNREAA DAYLTAFNLR 480
  481 PGANTLYWIE NGIFQTSVPY VVPYLDKFLA SE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..116] PSI-BLAST 28.154902 No description for 2oqrA was found.
    2 View Details [117..512] PSI-BLAST 32.221849 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.38012107359817 bayes_pls_golite062009
  • protein binding
    		•  0.90942498397011 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.802322336220332 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.41617031570549 bayes_pls_golite062009
  • DNA binding
    		•  0.29647638972446 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle