YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|15146226, gi|...

General Information:
Name(s) found: gi|39545872 [NCBI NR]
gi|22136784 [NCBI NR]
gi|21554033 [NCBI NR]
gi|18390773 [NCBI NR]
gi|15983370 [NCBI NR]
gi|15146226 [NCBI NR]
gi|14532726 [NCBI NR]
Description(s) found:
Found 17 descriptions.
SHOW ALL
  • gi|39545872|gb|AAR27999.1| TFIIA-L2 [Arabidopsis thaliana] [NCBI NR]
  • gi|22136784|gb|AAM91736.1| putative transcription factor IIA large subunit [Arabidopsis thaliana] [NCBI NR]
  • gi|21554033|gb|AAM63114.1| transcription factor IIA large subunit [Arabidopsis thaliana] [NCBI NR]
  • gi|18390773|ref|NP_563790.1| transcription factor IIA large subunit, putative / TFIIA large subunit, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|15983370|gb|AAL11553.1|AF424559_1 At1g07470/F22G5_13 [Arabidopsis thaliana] [NCBI NR]
  • gi|15146226|gb|AAK83596.1| At1g07470/F22G5_13 [Arabidopsis thaliana] [NCBI NR]
  • gi|14532726|gb|AAK64164.1| putative transcription factor IIA large subunit [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 375 amino acids

    Gene Ontology:
    Cellular Component: transcription factor TFIIA complex [IEA]
    Biological Process: transcription [ISS]
    transcription initiation from RNA polymerase II promoter [IEA]
    Molecular Function: transcription factor activity [ISS]
    RNA polymerase II transcription factor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTTTTTSAV YIHVIEDVVN KVREEFINNG GPGESVLSEL QGIWETKMMQ AGVLNGPIER  60
   61 SSAQKPTPGG PLTHDLNVPY EGTEEYETPT AEMLFPPTPL QTPLPTPLPG TADNSSMYNI 120
  121 PTGSSDYPTP GTENGVNIDV KARPSPYMPP PSPWTNPRLD VNVAYVDGRD EPERGNSNQQ 180
  181 FTQDLFVPSS GKRKRDDSSA HYQNGGSIPQ QDGASDAIPE ANFECAALRI TYVGDRKIPR 240
  241 DLIGSSSKIP QVDGPMPDPY DEMLSTPNIY SYQGPNEEFN EARTPAPNEI QTSTPVAVPN 300
  301 DIIEDDEELL NEDDDDDELD DLESGEDMNT QHLVLAQFDK VTRTKSRWKC SLKDGIMHIN 360
  361 DKDILFNKAT GEFDF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..122] FFAS03 4.26 Structure of a Yeast TFIIA/TBP/TATA-box DNA Complex
    2 View Details [123..289] PSI-BLAST 5.69897 Sec24
    3 View Details [290..375] PSI-BLAST 31.69897 HUMAN TFIIA/TBP/DNA COMPLEX


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle