| Protein: | gi|15146226, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 375 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15146226, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
243.0 | [0..1] | [375..1] |
|
Region A: Residues: [1-122] |
1 11 21 31 41 51
| | | | | |
1 MGTTTTTSAV YIHVIEDVVN KVREEFINNG GPGESVLSEL QGIWETKMMQ AGVLNGPIER 60
61 SSAQKPTPGG PLTHDLNVPY EGTEEYETPT AEMLFPPTPL QTPLPTPLPG TADNSSMYNI 120
121 PT
|
| Detection Method: |  |
| Confidence: | 4.26 |
| Match: | 1rm1C |
| Description: | Structure of a Yeast TFIIA/TBP/TATA-box DNA Complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [123-289] |
1 11 21 31 41 51
| | | | | |
1 GSSDYPTPGT ENGVNIDVKA RPSPYMPPPS PWTNPRLDVN VAYVDGRDEP ERGNSNQQFT 60
61 QDLFVPSSGK RKRDDSSAHY QNGGSIPQQD GASDAIPEAN FECAALRITY VGDRKIPRDL 120
121 IGSSSKIPQV DGPMPDPYDE MLSTPNIYSY QGPNEEFNEA RTPAPNE
|
| Detection Method: | |
| Confidence: | 5.69897 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [290-375] |
1 11 21 31 41 51
| | | | | |
1 IQTSTPVAVP NDIIEDDEEL LNEDDDDDEL DDLESGEDMN TQHLVLAQFD KVTRTKSRWK 60
61 CSLKDGIMHI NDKDILFNKA TGEFDF
|
| Detection Method: | |
| Confidence: | 31.69897 |
| Match: | 1nvpC |
| Description: | HUMAN TFIIA/TBP/DNA COMPLEX |
Matching Structure (courtesy of the PDB): |
|
