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Protein Overview: gi|44681452, gi|...

General Information:
Name(s) found: gi|44681452 [NCBI NR]
gi|38603958 [NCBI NR]
gi|30682222 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|44681452|gb|AAS47666.1| At2g23840 [Arabidopsis thaliana] [NCBI NR]
  • gi|38603958|gb|AAR24724.1| At2g23840 [Arabidopsis thaliana] [NCBI NR]
  • gi|30682222|ref|NP_179964.2| HNH endonuclease domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 284 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: nucleic acid binding [IEA]
    endonuclease activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHFSARLKL LSSNDGLSFG VDSRDQFRQS LYMAGGGSPL VPIRMSRLKF CARIFSSYSF  60
   61 PYKRKKIRDL DNTEKNLDID EDNDEWDFDG DDDGLETDDH LSCFRGLVLD ISYRPVNVVC 120
  121 WKRAICLEYM DKADVLEYYD QTVSSPTGSF YIPAVLRVPH LLQVVKRRRV KNSLSRKNIL 180
  181 LRDDYTCQYC SSRENLTIDH VMPVSRGGEW TWQNLVAACS RCNSRKGQKT ADEAHMKLLK 240
  241 VPKEPKDYDI VAIPLTNAAI RMLRSNKGMP EEWRQYLAKP LSET

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..102] deduced N/A No confident structure predictions are available.
    2 View Details [103..160] MSA 1.215996 View MSA. No confident structure predictions are available.
    3 View Details [161..284] PSI-BLAST 12.69897 No description for 2qgpA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle