Protein Overview: trf-1

General Information:
Name(s) found:	trf-1 / CE37519 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00006612 locus:trf-1 status:Partially_confirmed UniProt:G5EG80 protein_id:CAB07615.2 [WormBase] gi\|54110953\|emb\|CAB07615.2\| C. elegans protein F45G2.6, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR] gi\|32565349\|ref\|NP_499773.2\| TNF Receptor Associated Factor (TRAF) homolog family member (trf-1) [Caenorhabditis elegans] [NCBI NR] gi\|13650033\|gb\|AAK37546.1\|AF348168_1 TRF-1 [Caenorhabditis elegans] [NCBI NR] CE37519 WBGene00006612 locus:trf-1 Zinc finger, C3HC4 type (RING finger) status:Partially_confirmed TR:O62248 protein_id:CAB07615.2 [wormpep150.fasta] TNF Receptor associated Factor homolog (52.4 kD) (trf-1) [Caenorhabditis elegans]gi\|54110953\|emb\|CAB07615.2\| Hypothetical protein F45G2.6 [Caenorhabditis elegans]gi\|13650033\|gb\|AAK37546.1\| TRF-1 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas] 37519 WBGene00006612 locus:trf-1 Zinc finger, C3HC4 type (RING finger) status:Partially_confirmed TR:O62248 protein_id:CAB07615.2 [wormpep150-phg-orf-ecoli-rand.fasta] CE37519 WBGene00006612 locus:trf-1 Zinc finger, C3HC4 type (RING finger) status:Partially_confirmed UniProt:O62248_CAEEL protein_id:CAB07615.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE37519 WBGene00006612 locus:trf-1 Zinc finger, C3HC4 type (RING finger) status:Partially_confirmed UniProt:O62248_CAEEL protein_id:CAB07615.2\| [wormORF-contam.fasta] TNF Receptor Associated Factor (TRAF) homolog family member (trf-1) [Caenorhabditis elegans] [nr-271106-contam.fasta] TRF-1 [Caenorhabditis elegans] [nr-271106-contam.fasta] Hypothetical protein F45G2.6 [Caenorhabditis elegans] [nr-271106-contam.fasta] CE37519 WBGene00006612 locus:trf-1 Zinc finger, C3HC4 type (RING finger) status:Partially_confirmed UniProt:O62248 protein_id:CAB07615.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] CE37519 WBGene00006612 locus:trf-1 Zinc finger, C3HC4 type (RING finger) status:Partially_confirmed UniProt:G5EG80 protein_id:CAB07615.2 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta] CE37519 WBGene00006612 locus:trf-1 status:Partially_confirmed UniProt:G5EG80 protein_id:CAB07615.2 [wormpep246-ecoli-contam.fasta] TNF Receptor Associated Factor (TRAF) homolog OS=Caenorhabditis elegans GN=trf-1 PE=2 SV=1 [CAEEL.fasta.20160308]
Organism:	Caenorhabditis elegans
Length:	462 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	signal transduction [IEA] regulation of apoptosis [IEA]
Molecular Function:	zinc ion binding [IEA] protein binding [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSQSVMFKG GLPADCTCPI CEQALRDPIK LNCDHHYCRQ CFENENRTPG CAACQTIIQP  60
   61 ELCQHDRAKQ KQILALPVVC TFESSGCPWD GQLGTLHDHL SECTFKSSLK CEKCGRQFAK 120
  121 NDLEKHRAKC ELNRAVCSFC NKTIRDSDRE RHPKTCPQVI ISCPFQCGLT DRPRLEIEAH 180
  181 CPSCPNVDNV CPFVPYGCTF AGGKESIQQH LSDEPVRHLM YLCDEITDLK GTYELMERDM 240
  241 GSFNDRQTRI LSAAETCTEM FGPQLIWKID KLQQRTNEAK SGADTTIFSV PFMSHRFGYK 300
  301 MMACACLFGD GSSAGKSISL YVLLLKGEFD PTLEWPFHRA IKISLLDQNP RPEDRVNITY 360
  361 VIDPRKLKAN EKFLARPRGE RNAAFGSQSF CSLAILQNYV KDDKIYVQID VDRCETLPVQ 420
  421 LKSRDAKERK QMLDAMRAKT PDVRLHQVRP VTSQSSSAEL RV

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..77]	FFAS03	4.32	No description for 2f42A was found.
2	View Details	[78..261]	PSI-BLAST	51.69897	No description for 2i13A was found.
3	View Details	[262..462]	PSI-BLAST	21.221849	TNF receptor associated factor 3 (TRAF3); TRAF3

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.97

Protein Overview: trf-1

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: