| Protein: | trf-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 462 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for trf-1.
| Description | E-value | Query Range |
Subject Range |
|
|
526.0 | [0..3] | [384..2507] |
|
Region A: Residues: [1-77] |
1 11 21 31 41 51
| | | | | |
1 MTSQSVMFKG GLPADCTCPI CEQALRDPIK LNCDHHYCRQ CFENENRTPG CAACQTIIQP 60
61 ELCQHDRAKQ KQILALP
|
| Detection Method: |  |
| Confidence: | 4.32 |
| Match: | 2f42A |
| Description: | No description for 2f42A was found. |
|
Region A: Residues: [78-261] |
1 11 21 31 41 51
| | | | | |
1 VVCTFESSGC PWDGQLGTLH DHLSECTFKS SLKCEKCGRQ FAKNDLEKHR AKCELNRAVC 60
61 SFCNKTIRDS DRERHPKTCP QVIISCPFQC GLTDRPRLEI EAHCPSCPNV DNVCPFVPYG 120
121 CTFAGGKESI QQHLSDEPVR HLMYLCDEIT DLKGTYELME RDMGSFNDRQ TRILSAAETC 180
181 TEMF
|
| Detection Method: | |
| Confidence: | 51.69897 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [262-462] |
1 11 21 31 41 51
| | | | | |
1 GPQLIWKIDK LQQRTNEAKS GADTTIFSVP FMSHRFGYKM MACACLFGDG SSAGKSISLY 60
61 VLLLKGEFDP TLEWPFHRAI KISLLDQNPR PEDRVNITYV IDPRKLKANE KFLARPRGER 120
121 NAAFGSQSFC SLAILQNYVK DDKIYVQIDV DRCETLPVQL KSRDAKERKQ MLDAMRAKTP 180
181 DVRLHQVRPV TSQSSSAELR V
|
| Detection Method: | |
| Confidence: | 21.221849 |
| Match: | 1kzzA |
| Description: | TNF receptor associated factor 3 (TRAF3); TRAF3 |
Matching Structure (courtesy of the PDB): |
|
