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Protein Overview: trf-1

General Information:
Name(s) found: trf-1 / CE37519 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00006612 locus:trf-1 status:Partially_confirmed UniProt:G5EG80 protein_id:CAB07615.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 462 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: signal transduction [IEALink to PubMed article]
    regulation of apoptosis [IEALink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSQSVMFKG GLPADCTCPI CEQALRDPIK LNCDHHYCRQ CFENENRTPG CAACQTIIQP  60
   61 ELCQHDRAKQ KQILALPVVC TFESSGCPWD GQLGTLHDHL SECTFKSSLK CEKCGRQFAK 120
  121 NDLEKHRAKC ELNRAVCSFC NKTIRDSDRE RHPKTCPQVI ISCPFQCGLT DRPRLEIEAH 180
  181 CPSCPNVDNV CPFVPYGCTF AGGKESIQQH LSDEPVRHLM YLCDEITDLK GTYELMERDM 240
  241 GSFNDRQTRI LSAAETCTEM FGPQLIWKID KLQQRTNEAK SGADTTIFSV PFMSHRFGYK 300
  301 MMACACLFGD GSSAGKSISL YVLLLKGEFD PTLEWPFHRA IKISLLDQNP RPEDRVNITY 360
  361 VIDPRKLKAN EKFLARPRGE RNAAFGSQSF CSLAILQNYV KDDKIYVQID VDRCETLPVQ 420
  421 LKSRDAKERK QMLDAMRAKT PDVRLHQVRP VTSQSSSAEL RV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..77] FFAS03 4.32 No description for 2f42A was found.
    2 View Details [78..261] PSI-BLAST 51.69897 No description for 2i13A was found.
    3 View Details [262..462] PSI-BLAST 21.221849 TNF receptor associated factor 3 (TRAF3); TRAF3


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle