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Protein Overview: gi|44022089, gi|...

General Information:
Name(s) found: gi|6851013 [NCBI NR]
gi|44022089 [NCBI NR]
gi|402961 [NCBI NR]
gi|38454084 [NCBI NR]
gi|20197645 [NCBI NR]
gi|15226127 [NCBI NR]
gi|13449308 [NCBI NR]
Description(s) found:
Found 20 descriptions.
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  • gi|6851013|emb|CAA69765.3| ribosomal protein L5 [Arabidopsis thaliana] [NCBI NR]
  • gi|44022089|gb|AAS46638.1| At2g07725 [Arabidopsis thaliana] [NCBI NR]
  • gi|402961|emb|CAA47967.1| ribosomal protein 5 large subunit [Arabidopsis thaliana] [NCBI NR]
  • gi|38454084|gb|AAR20736.1| At2g07725 [Arabidopsis thaliana] [NCBI NR]
  • gi|20197645|gb|AAM15173.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15226127|ref|NP_178803.1| 60S ribosomal protein L5 (RPL5) [Arabidopsis thaliana] [NCBI NR]
  • gi|13449308|ref|NP_085491.1| ribosomal protein L5 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 185 amino acids

    Gene Ontology:
    Cellular Component: ribosome [IEA][ISS]
    intracellular [IEA]
    Biological Process: translation [IEA][ISS]
    Molecular Function: structural constituent of ribosome [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFPLNFHYED VSRQDPLLKP NHANVMEVPG SCEIRVVPKA PYNFIIKNGK LAMEIPRGQK  60
   61 FIQTQRGSTG KSFRSNPFLG SNKDKGYVSD LARQSTLRGH GMSNFSVRIS TVMSLLDFPV 120
  121 EIRKNSIQFS METEFCEFSP ELEDHFEIFE HIRGFNVTII TSANTQDETL PLWSGFLQKD 180
  181 EGETQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..185] PSI-BLAST 63.69897 Ribosomal protein L5

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural molecule activity
    		•  0.662519135971 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.652676036630401 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle