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Protein Overview: gi|7494406

General Information:
Name(s) found: gi|7494406 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • pir||D71616 ribosome releasing factor (OO, TP) PFB0390w [imported] - malaria parasite (Plasmodium falciparum) [NCBI NR]
    • Organism: Plasmodium falciparum
    Length: 498 amino acids

    Gene Ontology:
    Cellular Component: apicoplast [IDALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFQHFLSLH NEKKISMFFY TFLILYISHV RIFYDCLNLK NEKNYNVLLK NGNNNSPSYY  60
   61 FLNSNYRNNN NFLRRKENYQ RVLLLYNPKF NDGAKRNSYI LYAHSKKNKN KNKINHNINI 120
  121 TKRETVSRRD RDDEDDNYDD DDENYDDDDD NYDDDENYED DENYDDDDEN YDDGENYEDD 180
  181 ENYNDDENYD DDENYDDEYD DDDYPFNNDD IDIGDKDTPY ETQKSKIRSK DENVAHQNKG 240
  241 GNTLSLENYK IKKNANSDLE TDKKNKVKKK QDEEMDETNK NNKNETNEKD EKDEKEEKDD 300
  301 NINDNNDDIM EDEYEEDYIT EEHIKDLHKI CSEKMNKVYE FLKKESYRFN LNNVSNDMFE 360
  361 NEKVKINERI YTVKHICHIK KKENLFTITP YDPYFVNFLY QHFIKEFDEL KFYVKDKSLY 420
  421 AIIPPISENL KNEIKMKIKR KIEDSKVTLR TVRKQMMDKL EKFKNKIGKD IYFKQKNYIQ 480
  481 SIHDQTKKNI EKLFADTK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..87] deduced N/A No confident structure predictions are available.
    2 View Details [88..222] MSA 2.291996 View MSA. No confident structure predictions are available.
    3 View Details [223..334] deduced N/A No confident structure predictions are available.
    4 View Details [335..498] PSI-BLAST 53.69897 Ribosome recycling factor, RRF

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  0.838193922019645 bayes_pls_golite062009
  • translation regulator activity
    		•  0.51099545903621 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.44053908101724 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  0.32761172237831 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.54

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle