YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|45438312, gi|...

General Information:
Name(s) found: gi|45443443 [NCBI NR]
gi|45438312 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|45443443|ref|NP_994982.1| chaperone protein DnaJ [Yersinia pestis biovar Microtus str. 91001] [NCBI NR]
  • gi|45438312|gb|AAS63859.1| chaperone protein DnaJ [Yersinia pestis biovar Microtus str. 91001] [NCBI NR]
    • Organism: Yersinia pestis biovar Microtus str. 91001
    Length: 379 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKRDYYEVL GVSRDAEERE IKKAYKRLAM KFHPDRQSED KNAEEKFKEA KEAYEILTDA  60
   61 QKRAAYDQYG HAAFEQGGMG GGGFGGGGGG ADFSDIFGDV FGDIFGGGRR QQRASRGSDL 120
  121 RYNMDLTLEE AVRGVTKEIR IPTLDECDVC HGSGAKPGSS PVTCPTCHGA GQVQMRQGFF 180
  181 TVQQACPHCH GRGQIIKDPC NKCHGHGRVE KSKTLSVKIP AGVDTGDRIR LSGEGEAGEH 240
  241 GAPSGDLYVQ VQVKAHPIFE REGNNLYCEV PINFAMAALG GEIEVPTLDG RVKLKIPAET 300
  301 QTGKMFRMRG KGVKSVRGGS QGDLLCRVVV ETPVSLSEKQ KQLLRELEES FVGAAGEKNS 360
  361 PRAKSFLDGV KKFFDDLTR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..115] PSI-BLAST 25.045757 NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
    2 View Details [116..379] PSI-BLAST 44.69897 The crystal structure of Hsp40 Ydj1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • unfolded protein binding
    		•  3.04403163860617 bayes_pls_golite062009
  • heat shock protein binding
    		•  2.17994194200939 bayes_pls_golite062009
  • binding
    		•  2.03854863870179 bayes_pls_golite062009
  • chaperone binding
    		•  1.61155546076854 bayes_pls_golite062009
  • protein binding
    		•  1.35701123337504 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.2131700498174 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.12971478797926 bayes_pls_golite062009
  • DNA binding
    		•  0.8788643398536 bayes_pls_golite062009
  • Hsp70 protein binding
    		•  0.541755903922701 bayes_pls_golite062009
  • catalytic activity
    		•  0.106988907594358 bayes_pls_golite062009
    2
    Term Confidence Notes
  • protein disulfide isomerase activity
    		•  2.4409950647303 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, transposing S-S bonds
    		•  2.4409950647303 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, interconverting keto- and enol-groups
    		•  2.23398279564144 bayes_pls_golite062009
  • binding
    		•  2.13705208493215 bayes_pls_golite062009
  • unfolded protein binding
    		•  2.04158808514315 bayes_pls_golite062009
  • protein binding
    		•  1.32690171510656 bayes_pls_golite062009
  • catalytic activity
    		•  0.276917867171685 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle