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Protein Overview: SMC_MYCLE

General Information:
Name(s) found: SMC_MYCLE [Swiss-Prot]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • Chromosome partition protein Smc OS=Mycobacterium leprae (strain TN) GN=smc PE=3 SV=1 [Swiss-Prot]
    • Organism: Mycobacterium leprae TN
    Length: 1203 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLKSLTLKG FKSFASPTTL RFEPGITAVV GPNGSGKSNV VDALAWVMGE QGAKTLRGSK  60
   61 MEDVIFAGTL SRAPLGRAEV TLIIDNSDNV LPIEYSEVSI TRRMFRDGAS EYEINGSSCR 120
  121 LMDVQELLSD SGIGREMHVI VGQGKLDQIL QSRPEDRRTF IEEAAGILKY RRRKEKALRK 180
  181 LDAMSANLAR LTDLTTELRR QLKPLSRQAE VARRAATIQA DLRDARLRLA ADDLVSRQGQ 240
  241 RDAIVEAETM MRRDHDEAAA RLAVASEELA AHEAALTELS GRAESVQQIW FGLSTLVERV 300
  301 SATIRIAGER AYHLDVDPAT PSDTDPDVLE AEAQQMEVAE QQLLAELAVA RTQLEAARAE 360
  361 LADRERHAVE ADKAHLEAVR AEADRREGLA LLAGQVETMR ARIESIDDSV ARLSERIEEV 420
  421 TARTQQILAE FETVQGRVGE LDQSEVHLDE QHERAVAALR FANERVAELQ SAERDAERQV 480
  481 VSLRARIDAL TMGLERKDGA AWLARNYSDT GLLGSIAKLV KVRPGYEAAL AAVLGPAADA 540
  541 LAVDSLGAAR SALTALKEAD AGRATLVLAD WLADAGPACV TGLPDGAQRA LDLIEAPPWL 600
  601 QGALIAMLYG VVVVNYLAEA LGVVDICPQL RVVTVDGDLV GAGWVSGGSG RRLSTLEVTS 660
  661 EIDKAGAELA AAEAHMAQLN AALSGALSEQ VAHSDATEQA LVALNESDTA ILSMYDQLGR 720
  721 LGQEVRAAEA EWESLLAQRE ELEARRVSIL EEVVELETRL HNVEQIQHVH ALDENSAAAR 780
  781 QLIVAAAEEA RGVEVEALLA VRTAEERVNA VCGRANSLRR AAAAEREVRL RDQQAHAARI 840
  841 RAAAVAAAVT DCGQLLASRL TQAVDLAARH RDALATERQQ RSVAIAAVRY EVNTLRVRLA 900
  901 TLTDSLHRDE VANVQAALRI EQLEQLVLEQ FGIAPVDLIA EYGPQVALLP TELEMAEFQQ 960
  961 ARERGEQVTS PAPMPYDRAT QERRAKRAER ELAELGRVNP LALEEFAALE ERYNFLSTQL1020
 1021 EDVKGARKDL LDVVAEVDAR ILQVFSDAFV DVEREFRGVF TSLFPGGEGR LRLTDPDDML1080
 1081 TTGIEVEARP SGKKVSRLSL LSGGEKSLIA VAMLVAIFKA RPSPFYIMDE VEAALDDVNL1140
 1141 CRLIGVFEQL RGQSQLIIIT HQKPTMEVAD TLYGVTMQGD GITAVISQRM RGQQVESLVT1200
 1201 SSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..165] PSI-BLAST 41.221849 Structural biochemistry of ATP-driven dimerization and DNA stimulated activation of SMC ATPases.
    2 View Details [166..500] FFAS03 2.99 Tropomyosin
    3 View Details [501..697] FFAS03 4.86 Smc hinge domain
    4 View Details [698..918] deduced N/A No confident structure predictions are available.
    5 View Details [919..1046] deduced N/A No confident structure predictions are available.
    6 View Details [1047..1203] PSI-BLAST 17.221849 Structural biochemistry of ATP-driven dimerization and DNA stimulated activation of SMC ATPases.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.470983068319171 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0582794297634999 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.225375777463061 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle