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Protein Overview: RS20_ECOLI

General Information:
Name(s) found: RS20_ECOLI [Swiss-Prot]
Description(s) found:
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  • pir||R3EC20 ribosomal protein S20/L26 [validated] - Escherichia coli (strain K-12) [NCBI NR]
  • gi|62288964|sp|P0A7U7.2|RS20_ECOLI RecName: Full=30S ribosomal protein S20 [NCBI NR]
  • gi|581224|emb|CAA27968.1| ribosomal protein S20 [Escherichia coli] [NCBI NR]
  • pir||B90632 30S ribosomal subunit protein S20 [imported] - Escherichia coli (strain O157:H7, substrain RIMD 0509952) [NCBI NR]
  • pir||A85483 30S ribosomal subunit protein S20 [imported] - Escherichia coli (strain O157:H7, substrain EDL933) [NCBI NR]
  • gi|21321906|dbj|BAB96593.1| 30S ribosomal subunit protein S20 [Escherichia coli W3110] [NCBI NR]
  • gi|209747152|gb|ACI71883.1| 30S ribosomal subunit protein S20 [Escherichia coli] [NCBI NR]
  • gi|209747150|gb|ACI71882.1| 30S ribosomal subunit protein S20 [Escherichia coli] [NCBI NR]
  • gi|209747148|gb|ACI71881.1| 30S ribosomal subunit protein S20 [Escherichia coli] [NCBI NR]
  • gi|209747146|gb|ACI71880.1| 30S ribosomal subunit protein S20 [Escherichia coli] [NCBI NR]
  • gi|209747144|gb|ACI71879.1| 30S ribosomal subunit protein S20 [Escherichia coli] [NCBI NR]
  • gi|116666619|pdb|1VS7|T Chain T, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains [NCBI NR]
  • gi|116666567|pdb|1VS5|T Chain T, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains [NCBI NR]
  • 30S ribosomal protein S20 - Escherichia coli [Swiss-Prot]
  • 30S ribosomal subunit protein S20 [Escherichia coli K12]gi|15829280|ref|NP_308053.1| 30S ribosomal subunit protein S20 [Escherichia coli O157:H7]gi|26245944|ref|NP_751983.1| 30S ribosomal protein S20 [Escherichia coli CFT073]gi|15799705|ref|NP_285717.1 [nrdb_11152004_Chlamydomonas]
  • 30S ribosomal protein S20 [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • ribosomal protein S20 [Escherichia coli] [nr-271106-contam.fasta]
  • Chain T, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is [nr-271106-contam.fasta]
  • 30S ribosomal protein S20 OS=Escherichia coli (strain K12) GN=rpsT PE=1 SV=2 [uniprot-Ecoli-reviewed-110511.fasta]
    • Organism: Escherichia coli
    Length: 87 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANIKSAKKR AIQSEKARKH NASRRSMMRT FIKKVYAAIE AGDKAAAQKA FNEMQPIVDR  60
   61 QAAKGLIHKN KAARHKANLT AQINKLA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..87] PSI-BLAST 17.39794 No description for 1vs5T was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.29274818810663 bayes_pls_golite062009
  • structural molecule activity
    		•  8.72221486384695 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle