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Protein Overview: gi|25348828, gi|...

General Information:
Name(s) found: gi|25348828 [NCBI NR]
gi|16505642 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|25348828|pir||AE1069 mrr restriction system protein [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) [NCBI NR]
  • gi|16505642|emb|CAD03372.1| mrr restriction system protein [Salmonella enterica subsp. enterica serovar Typhi] [NCBI NR]
    • Organism: Salmonella enterica subsp. enterica serovar Typhi
    Length: 304 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVPTYDKFI EPVLRFLATR PEGALVREVR EAAAEMLGLN EQQRAEVITS GQLTYQNRTG  60
   61 WAHDRLKRAG LSQSLSRGKW CLTPAGMSWV ASHPQPMTEQ EVSHFACDFN GVKLSKPADA 120
  121 VALDPQPESI EDDELARSSP DDRLEQALNE IRESVAEELL ENLLQVSPAR FEVIVLDVLH 180
  181 RLGYGGHRGD LQRVGGTGDG GIDGIISLDK LGLEKVYVQA KRWKGTVGSA EVRGFYGALP 240
  241 EQKVKRGVFI TTSGFTAHAR DYANKVEGLV LVDGDRLVHL MIDNDIGVSS RLLKLPKLDM 300
  301 DYFE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..135] FFAS03 0.985 No description for 2p8tA was found.
    2 View Details [136..304] PSI-BLAST 6.69897 Hypothetical protein AF1548

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.683379929086364 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.16959343932447 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.0949481158963694 bayes_pls_golite062009
  • DNA binding
    		•  0.00746597740509714 bayes_pls_golite062009
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.286388432783973 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle