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Protein Overview: gi|16759213

General Information:
Name(s) found: gi|16759213 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|16759213|ref|NP_454830.1| zinc metallopeptidase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] [NCBI NR]
    • Organism: Salmonella enterica subsp. enterica serovar Typhi str. CT18
    Length: 450 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSILWNLAA FIIALGVLIT VHEFGHFWVA RRCGVRVERF SIGFGKALWR RTDRYGTEYV  60
   61 IALIPLGGYV KMLDERAEPV APELRRHAFN NKTVGQRAAI IAAGPVANFI FAIFAYWLVF 120
  121 IIGVPGVRPV IGEITPNSIA AQAQIAPGTE LKAVDGIETP DWDAVRLQLV SKIGDQQTTV 180
  181 SVAPFGSDQR QDKTLDLRHW AFEPDKQDPV SSLGIRPRGP QIEPVLSEVQ ANSAASKAGL 240
  241 QAGDRIVKVD GQPLTQWMKF VTFVRDNPGK PLALEIERQG SALSLTLTPD TKSVNGKAEG 300
  301 FAGVVPKIIP LPEEYKTIRQ YGPFSAILEA TDKTWQLMKL TVNMLGKLIT GDVKLNNLSG 360
  361 PISIAQGAGM SAEFGVIYYL MFLALISVNL GIINLFPLPV LDGGHLLFLA IEKLKGGPVS 420
  421 ERVQDFSYRI GSILLVLLMG LALFNDFSRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..293] PSI-BLAST 35.69897 Protease Do (DegP, HtrA), C-terminal domains; Protease Do (DegP, HtrA), catalytic domain
    2 View Details [294..376] PSI-BLAST 11.0 Photosystem II D1 C-terminal processing protease
    3 View Details [377..450] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein binding
    		•  2.10639523340529 bayes_pls_golite062009
  • binding
    		•  1.92577219161709 bayes_pls_golite062009
  • peptidase activity
    		•  0.380735225711727 bayes_pls_golite062009
  • hydrolase activity
    		•  0.361589943259802 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.0975384861219175 bayes_pls_golite062009
  • protein domain specific binding
    		•  0.0675941009743699 bayes_pls_golite062009
    2
    Term Confidence Notes
  • protein binding
    		•  2.10639523340529 bayes_pls_golite062009
  • binding
    		•  1.92577219161709 bayes_pls_golite062009
  • peptidase activity
    		•  0.380735225711727 bayes_pls_golite062009
  • hydrolase activity
    		•  0.361589943259802 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.0975384861219175 bayes_pls_golite062009
  • protein domain specific binding
    		•  0.0675941009743699 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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