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Protein Overview: XLYB_BACSU

General Information:
Name(s) found: XLYB_BACSU [Swiss-Prot]
Description(s) found:
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  • gi|2633600|emb|CAB13103.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein [Bacillus subtilis subsp. subtilis str. 168] [NCBI NR]
  • gi|221309095|ref|ZP_03590942.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp. subtilis str. 168] [NCBI NR]
  • gi|16078311|ref|NP_389128.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp. subtilis str. 168] [NCBI NR]
  • N-acetylmuramoyl-L-alanine amidase XlyB OS=Bacillus subtilis (strain 168) GN=xlyB PE=3 SV=1 [Swiss-Prot]
  • N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp. subtilis str. 168]gi|2633600|emb|CAB13103.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp. subtilis str. 168]gi|2645866|gb|AAB87514.1| N-acetylmuramoyl-L-alanine amidase [Bacill [nrdb_11152004_Chlamydomonas]
  • N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis] [nr-271106-contam.fasta]
  • N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp. subtilis str. 168] [nr-271106-contam.fasta]
    • Organism: Bacillus subtilis subsp. subtilis str. 168
    Length: 317 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIPVKKNLV SEAKYALKCP NAMSAEYITI HNTANDASAA NEISYMIGNT SSTSFHFAVD  60
   61 DQEVIQGLPL NRNAWHTGDG TNGPGNRKSI GVEICYSKSG GPKYEAAEAL AISFVAQLLK 120
  121 ERGWGIDRVR KHQDWSGKYC PHRILSEGRW DQVKAAIEKE LNGGVSAKKA AVSSSASEYH 180
  181 VKKGDTLSGI AASHGASVKT LQSINHITDP NHIKIGQVIK LPQTASASKS HAASSYPLPS 240
  241 GVIKVTSPLT QGTKVKQVQT ALAALYFYPD KGAKNHGVDG VYGPKTANAV KRFQSVSGLT 300
  301 ADGIYGPKTK AKMEEKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..162] PSI-BLAST 23.69897 Structure of PlyL
    2 View Details [163..233] PSI-BLAST 4.154902 36 kDa soluble lytic transglycosylase, SLT35
    3 View Details [234..317] PSI-BLAST 8.0 HYDROLASE METALLO (ZN) DD-PEPTIDASE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.09849742457731 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle