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Protein Overview: gi|50948567, gi|...

General Information:
Name(s) found: gi|50948567 [NCBI NR]
gi|42408445 [NCBI NR]
gi|125604352 [NCBI NR]
gi|115477861 [NCBI NR]
gi|113624495 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|50948567|ref|XP_483811.1| putative LOB domain protein 17 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|42408445|dbj|BAD09627.1| putative LOB domain protein 17 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|125604352|gb|EAZ43677.1| hypothetical protein OsJ_28302 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115477861|ref|NP_001062526.1| Os08g0563400 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113624495|dbj|BAF24440.1| Os08g0563400 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 215 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGLGSPCGA CKFLRRKCVK GCVFAPYFCH EQGAAHFAAI HKVFGASNAS KILMHLPVSD  60
   61 RCEAAVTMSY EAQARLRDPI YGCVAHIFSL QQQVVSLQAQ LESLKAQATQ GYGDGCSISS 120
  121 PQNDSCGNML TSIVQDEQQF VGPTMASNSS VKNENHSYIA NGHLAPMSAQ SSQGFEAELC 180
  181 MAEYSNTNPC CSVQGNWYHD MEDLQSVAFA YLNQA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..123] Pfam 66.677781 No description for PF03195.5 was found. No confident structure predictions are available.
    2 View Details [124..215] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle