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View Structure Prediction Details

Protein: gi|50948567, gi|...
Organism: Oryza sativa Japonica Group
Length: 215 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50948567, gi|....

Description E-value Query
Range
Subject
Range
LBD22_ARATH - LOB domain-containing protein 22 OS=Arabidopsis thaliana GN=LBD22 PE=2 SV=1
213.0 [0..6] [209..35]

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Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGLGSPCGA CKFLRRKCVK GCVFAPYFCH EQGAAHFAAI HKVFGASNAS KILMHLPVSD  60
   61 RCEAAVTMSY EAQARLRDPI YGCVAHIFSL QQQVVSLQAQ LESLKAQATQ GYGDGCSISS 120
  121 PQN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 66.677781
Match: PF03195.5
Description: No description for PF03195.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [124-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSCGNMLTSI VQDEQQFVGP TMASNSSVKN ENHSYIANGH LAPMSAQSSQ GFEAELCMAE  60
   61 YSNTNPCCSV QGNWYHDMED LQSVAFAYLN QA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle