YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|50948369, gi|...

General Information:
Name(s) found: gi|50948369 [NCBI NR]
gi|50725541 [NCBI NR]
gi|42408971 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|50948369|ref|XP_483712.1| putative MYST1 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|50725541|dbj|BAD33010.1| putative MYST1 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|42408971|dbj|BAD10227.1| putative MYST1 [Oryza sativa Japonica Group] [NCBI NR]
  • putative MYST1 [Oryza sativa (japonica cultivar-group)]gi|42408971|dbj|BAD10227.1| putative MYST1 [Oryza sativa (japonica cultivar-group)]gi|50725541|dbj|BAD33010.1| putative MYST1 [Oryza sativa (japonica cultivar-group)] [nrdb_11152004_Chlamydomonas]
  • putative MYST1 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 645 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGHPPATSPA GATAGVSVKV SDRYVEIKNG IFELTLSNPD GIVTGVRYNG VDNLMEILNK  60
   61 EDNRGYWDLV WSKLGERTGI FDVIKGTEFR IIYQDENHAE VSFVRTWDPS LEGKAVPLNI 120
  121 DKRFIVLRGC SGFYTYGIYE HQEGWPGFSL GETRVAFKLR KDKFHYMALA DDRQRIMPMP 180
  181 EDRVPPRGQQ LAYPEAVLLV DPINPDLRGE VDDKYQYSCE DQYNNVHGWI SFDPPIGFWQ 240
  241 ITPSDEFRTG GPVKQNLTSH VGPTMLAMFL SGHYAGDDLT PKFLTGEYWK KVHGPVFMYL 300
  301 NSSWDGSDPT LLWEDAKVQM MIEKESWPYC FALSDDFQKT EQRGCISGRL LVRDRYLDDA 360
  361 DLYATSAYVG LALPGDVGSW QRECKGYQFW CRAEDDGSFC IRNIVAGDYN LYAWVPGFIG 420
  421 DYKLDAKLTI SSGDDIYLGD LVYEPPRDGP TMWEIGIPDR SASEFFVPDP NPNYVNRLYI 480
  481 NHPDRFRQYG LWERYAELYP DGDLVYTIGQ SDYTTDWFFA QVNRRTDQST YQPTTWQIKF 540
  541 NLDSVSPNST YKFRVALASS ANAELQVRFN DQDRTAPHFT TGLIGKDNTI ARHGIHGLYW 600
  601 LFNIDVSGAW LVQGMNTIYL KQPRNQSPFQ GLMYDYLRME GPSGS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..645] PSI-BLAST 132.0 Rhamnogalacturonan lyase from Aspergillus aculeatus

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.24087518312023 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle